RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 HTR1FP30939 366 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 RBMXP38159 391 aaKnown RBP11.98□□□□□ -0.49
VAMP4-203ENST00000474047 MDH2P40926 338 aaKnown RBP11.98□□□□□ -0.49
VAMP4-203ENST00000474047 CD200P41217 278 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 HNRNPA0Q13151 305 aaKnown RBP11.98□□□□□ -0.49
VAMP4-203ENST00000474047 MAB21L1Q13394 359 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 ZNF322Q6U7Q0 402 aaPredicted RBP11.98□□□□□ -0.49
VAMP4-203ENST00000474047 IL17RELQ6ZVW7 336 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 PRSS45Q7RTY3 260 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 LRRC28Q86X40 367 aaPredicted RBP11.98□□□□□ -0.49
VAMP4-203ENST00000474047 MUC20Q8N307 709 aaPredicted RBP11.98□□□□□ -0.49
VAMP4-203ENST00000474047 TRUB1Q8WWH5 349 aaKnown RBP11.98□□□□□ -0.49
VAMP4-203ENST00000474047 DVL3Q92997 716 aaPredicted RBP11.98□□□□□ -0.49
VAMP4-203ENST00000474047 OR8B4Q96RC9 309 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 TBX5Q99593 518 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 PAPOLGQ9BWT3 736 aaKnown RBP11.98□□□□□ -0.49
VAMP4-203ENST00000474047 CLN6Q9NWW5 311 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 ZNF319Q9P2F9 582 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 ZNF391Q9UJN7 358 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 COPS3Q9UNS2 423 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 TRAV20A0A0B4J274 112 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 A0A1B0GWJ7 208 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 A6NLC8 198 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 ZNF205O95201 554 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 SRD5A1P18405 259 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 SRP14P37108 136 aaKnown RBP11.97□□□□□ -0.49
VAMP4-203ENST00000474047 GATA4P43694 442 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 ROM1Q03395 351 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 ZMYND11Q15326 602 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 TMEM155Q4W5P6 130 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 PRAMEF6Q5VXH4 476 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 FAHD2BQ6P2I3 314 aaPredicted RBP11.97□□□□□ -0.49
VAMP4-203ENST00000474047 BOLLQ8N9W6 283 aaKnown RBP11.97□□□□□ -0.49
VAMP4-203ENST00000474047 OR8B12Q8NGG6 310 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 FAHD2AQ96GK7 314 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 HRASLS5Q96KN8 279 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 APOL4Q9BPW4 351 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 GMPPBQ9Y5P6 360 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 hCG_38984A0A1B0GV85 526 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 ANXA2P2A6NMY6 339 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 SNTNA6NMZ2 147 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 PLPP2O43688 288 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 FAM20BO75063 409 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 FAM157CP0CG43 387 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 DCTDP32321 178 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 TMED1Q13445 227 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 ZNF181Q2M3W8 571 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 YIPF7Q8N8F6 280 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 OR10H4Q8NGA5 316 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 SIGLEC11Q96RL6 698 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 PBOV1Q9GZY1 135 aa11.97□□□□□ -0.49
VAMP4-203ENST00000474047 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.97□□□□□ -0.49
VAMP4-203ENST00000474047 PPIAL4EA0A075B759 164 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 hCG_1807616A0A1W2PRN6 198 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 PPIAL4DF5H284 164 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 LOC110117498-PIK3R3F6TDL0 507 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 APOL3O95236 402 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 KRT8P05787 483 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 OR2T7P0C7T2 308 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 PPIAL4FP0DN26 164 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 MAP2K3P46734 347 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 LCN2P80188 198 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 EGR3Q06889 387 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 MPPED2Q15777 294 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 PLPP7Q8NBV4 271 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 OR2T27Q8NH04 317 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 PIGCQ92535 297 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 UBE2FQ969M7 185 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 HIST1H2AAQ96QV6 131 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 MICU1Q9BPX6 476 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 C1orf123Q9NWV4 160 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 RNF7Q9UBF6 113 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 RHBDD3Q9Y3P4 386 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 PPIAL4AQ9Y536 164 aa11.96□□□□□ -0.49
VAMP4-203ENST00000474047 ZFHX3Q15911 3703 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 FOXH1O75593 365 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 PMELP40967 661 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 IL5RAQ01344 420 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 ZSCAN26Q16670 478 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 BCL2L15Q5TBC7 163 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 MEDAGQ5VYS4 303 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 THAP5Q7Z6K1 395 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 PRIMA1Q86XR5 153 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 RFLNBQ8N5W9 214 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 ZNF555Q8NEP9 628 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 Q8TCH9 128 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 SLC29A1Q99808 456 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 PATZ1Q9HBE1 687 aaKnown RBP11.95□□□□□ -0.5
VAMP4-203ENST00000474047 ABCB9Q9NP78 766 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 FAM206AQ9NX38 181 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 MPC1Q9Y5U8 109 aa11.95□□□□□ -0.5
VAMP4-203ENST00000474047 A0A0G2JMP0 313 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 A0A0U1RQV5 110 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 A0A0X1KG70 313 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 ZNF850A8MQ14 1090 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 MAGEB4O15481 346 aaPredicted RBP11.94□□□□□ -0.5
VAMP4-203ENST00000474047 ENTPD6O75354 484 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 RPP14O95059 124 aaKnown RBP11.94□□□□□ -0.5
VAMP4-203ENST00000474047 MTNR1AP48039 350 aa11.94□□□□□ -0.5
VAMP4-203ENST00000474047 SNRPGP62308 76 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms