RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ZNF321PQ8N8H1 164 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 OR9G4Q8NGQ1 327 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 OR5B3Q8NH48 314 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 OR6X1Q8NH79 312 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 LINC01006Q8NI28 216 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 ENKURQ8TC29 256 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 RAB2BQ8WUD1 216 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 NDRG1Q92597 394 aaKnown RBP3.05□□□□□ -1.92
BRCA1-212ENST00000473961 SMIM10Q96HG1 83 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 C9orf72Q96LT7 481 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 IMMP1LQ96LU5 166 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 OPALINQ96PE5 141 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 BCL7BQ9BQE9 202 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 ANKRD60Q9BZ19 345 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 ZYG11BQ9C0D3 744 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 OR51B5Q9H339 312 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 TDRD3Q9H7E2 651 aaKnown RBP3.05□□□□□ -1.92
BRCA1-212ENST00000473961 NANOGQ9H9S0 305 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 ANKHQ9HCJ1 492 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 RPS10P5Q9NQ39 176 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 MRPL40Q9NQ50 206 aaKnown RBP3.05□□□□□ -1.92
BRCA1-212ENST00000473961 PXMP2Q9NR77 195 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 PTTG3PQ9NZH4 202 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 CLCF1Q9UBD9 225 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 SLC17A4Q9Y2C5 497 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 KIF13BQ9NQT8 1826 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 PIK3C2BO00750 1634 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 ALKQ9UM73 1620 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 COL2A1P02458 1487 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-212ENST00000473961 RTL9Q8NET4 1388 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 MROH5Q6ZUA9 1318 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 GJE1A6NN92 205 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 ANKRD63C9JTQ0 380 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 ATP6V1G2-DDX39BF2Z307 99 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 F6UB75 175 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 SPOPO43791 374 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 EIF4E2O60573 245 aaKnown RBP3.04□□□□□ -1.92
BRCA1-212ENST00000473961 NOS1APO75052 506 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-212ENST00000473961 SRSF10O75494 262 aaKnown RBP3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CCNKO75909 580 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CDK14O94921 469 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 ACTL6AO96019 429 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 OTCP00480 354 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 IFNA14P01570 189 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 HLA-HP01893 362 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 HLA-DRAP01903 254 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 UBCP0CG48 685 aaKnown RBP3.04□□□□□ -1.92
BRCA1-212ENST00000473961 TRAPPC2P0DI81 140 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 TRAPPC2BP0DI82 140 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CT45A6P0DMU7 189 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CT45A5P0DMU8 189 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CT45A7P0DMV0 189 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 F2RP25116 425 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CD40LGP29965 261 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 AQP2P41181 271 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CSNK1DP48730 415 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 HCAR3P49019 387 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 LYZP61626 148 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 MRPS15P82914 257 aaKnown RBP3.04□□□□□ -1.92
BRCA1-212ENST00000473961 GNA12Q03113 381 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 PMS2P3Q13401 168 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 TRAM2Q15035 370 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 IL17AQ16552 155 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 ZNF181Q2M3W8 571 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CT45A1Q5HYN5 189 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 THEM4Q5T1C6 240 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 UBE2UQ5VVX9 321 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 ZNF544Q6NX49 715 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 XKRXQ6PP77 449 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 ZNF767PQ75MW2 155 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CRLF3Q8IUI8 442 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 APRG1Q8IVJ8 170 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CTAGE3PQ8IX95 158 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 C12orf56Q8IXR9 622 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 DEFB107AQ8IZN7 70 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CEND1Q8N111 149 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 C4orf33Q8N1A6 199 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 OR4F15Q8NGB8 312 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 OR2A1Q8NGT9 310 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 OR5K2Q8NHB8 316 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CT45A3Q8NHU0 189 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 TCP10LQ8TDR4 215 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 ECHDC3Q96DC8 303 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 SLC35E1Q96K37 410 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 RILPQ96NA2 401 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 KIFC1Q9BW19 673 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CHID1Q9BWS9 393 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 ACTR3CQ9C0K3 210 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CWH43Q9H720 699 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 LYRM4Q9HD34 91 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 FBXO8Q9NRD0 319 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CTPS2Q9NRF8 586 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 CCL28Q9NRJ3 127 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 ENPP5Q9UJA9 477 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 ZNF229Q9UJW7 825 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 STOML2Q9UJZ1 356 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 TP53TG3Q9ULZ0 132 aa3.04□□□□□ -1.92
BRCA1-212ENST00000473961 NFASCO94856 1347 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 MON2Q7Z3U7 1717 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 ZNF816-ZNF321PA0A0X1KG74 233 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms