RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TLR4O00206 839 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 FAAHO00519 579 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 KPNA4O00629 521 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GNGT2O14610 69 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CDC42EP2O14613 210 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 MAGEB3O15480 346 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 AQP9O43315 295 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF749O43361 778 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CHST10O43529 356 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR10H3O60404 316 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 FCMRO60667 390 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PRAF2O60831 178 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ENTPD6O75354 484 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CSO75390 466 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GMNNO75496 209 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CCNB2O95067 398 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 KCNK2O95069 426 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GADD45GO95257 159 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 NSA2O95478 260 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SLC2A10O95528 541 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 LALBAP00709 142 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ATP1B1P05026 303 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CDK1P06493 297 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 STSP08842 583 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 HBQ1P09105 142 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 IFI6P09912 130 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CCDC159P0C7I6 412 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GKN3PP0CG01 181 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CT45A8P0DMV1 189 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CT45A9P0DMV2 189 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CLUP10909 449 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 DBTP11182 482 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PSKH1P11801 424 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PIPP12273 146 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 POU2F1P14859 743 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 FOLR1P15328 257 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GNSP15586 552 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CSNK2A2P19784 350 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TBXA2RP21731 343 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 AADACP22760 399 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CPN2P22792 545 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PTAFRP25105 342 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 DUTP33316 252 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GABRA3P34903 492 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 NUDT1P36639 197 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OMPP47874 163 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR1D4P47884 311 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 IDH2P48735 452 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TGM4P49221 684 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CSNK1EP49674 416 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 NPY4RP50391 375 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 XKP51811 444 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF41P51814 821 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ARFIP1P53367 373 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 MTCP1P56278 107 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CLDN6P56747 220 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 RGS8P57771 180 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR1D5P58170 312 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TAS2R41P59536 307 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CXCR4P61073 352 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 VBP1P61758 197 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 NCS1P62166 190 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 RPP38P78345 283 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 BTG2P78543 158 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 HPCAP84074 193 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ACY1Q03154 408 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 RELAQ04206 551 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 EMX1Q04741 257 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 RGS1Q08116 209 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 LRRC74AQ0VAA2 488 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 NPRL3Q12980 569 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 IL18R1Q13478 541 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TRA2AQ13595 282 aaKnown RBP eCLIP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 DGCR6Q14129 220 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 KIAA0141Q14154 515 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF273Q14593 569 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 INSL4Q14641 139 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 HEPACAMQ14CZ8 416 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 EBPQ15125 230 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PTGES3Q15185 160 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ELOCQ15369 112 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CD226Q15762 336 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 MICAQ29983 383 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 HYAL4Q2M3T9 481 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PGGHGQ32M88 737 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 RFX4Q33E94 735 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ARHGAP11BQ3KRB8 267 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZBED5Q49AG3 693 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 C14orf28Q4W4Y0 310 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 GPAT3Q53EU6 434 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TRMT12Q53H54 448 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CT45A2Q5DJT8 189 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF311Q5JNZ3 666 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 RBM48Q5RL73 367 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 PDZK1Q5T2W1 519 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 MRPL2Q5T653 305 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SYT6Q5T7P8 510 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 C9orf66Q5T8R8 295 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 C1orf189Q5VU69 101 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 UBE2UQ5VVX9 321 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms