RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 RGCCQ9H4X1 137 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 UFSP2Q9NUQ7 469 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 UBAP1Q9NZ09 502 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 MRM2Q9UI43 246 aaKnown RBP15.92■□□□□ 0.14
PTCD3-210ENST00000473829 TMEM269A0A1B0GVZ9 245 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 ZNF670-ZNF695F2Z2N8 137 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 FAM20BO75063 409 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 ENTPD6O75354 484 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 ZNF254O75437 659 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 PTBP3O95758 552 aaKnown RBP15.91■□□□□ 0.14
PTCD3-210ENST00000473829 CFL1P23528 166 aaKnown RBP15.91■□□□□ 0.14
PTCD3-210ENST00000473829 DCTDP32321 178 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 RIDAP52758 137 aaKnown RBP15.91■□□□□ 0.14
PTCD3-210ENST00000473829 DVL1P1P54792 670 aaPredicted RBP15.91■□□□□ 0.14
PTCD3-210ENST00000473829 ZSCAN26Q16670 478 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 ZNF181Q2M3W8 571 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 CR1LQ2VPA4 569 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 FAM120AOSQ5T036 256 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 WDR86Q86TI4 376 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 LRRC28Q86X40 367 aaPredicted RBP15.91■□□□□ 0.14
PTCD3-210ENST00000473829 RAB39BQ96DA2 213 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 PBOV1Q9GZY1 135 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 CDC42EP3Q9UKI2 254 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 NOP16Q9Y3C1 178 aaKnown RBP15.91■□□□□ 0.14
PTCD3-210ENST00000473829 RHBDD3Q9Y3P4 386 aa15.91■□□□□ 0.14
PTCD3-210ENST00000473829 ARHGAP32A7KAX9 2087 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 A0A1W2PQL4 384 aaPredicted RBP15.9■□□□□ 0.14
PTCD3-210ENST00000473829 ANKRD30BLA7E2S9 258 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 IFNL4K9M1U5 179 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 DLGAP1O14490 977 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 PHYHO14832 338 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 GABRB1P18505 474 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 SNRPGP62308 76 aaKnown RBP15.9■□□□□ 0.14
PTCD3-210ENST00000473829 POU4F2Q12837 409 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 CHRFAM7AQ494W8 412 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 TMEM155Q4W5P6 130 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 Q8TCH9 128 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 TRUB1Q8WWH5 349 aaKnown RBP15.9■□□□□ 0.14
PTCD3-210ENST00000473829 TMEM186Q96B77 213 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 GMPPBQ9Y5P6 360 aa15.9■□□□□ 0.14
PTCD3-210ENST00000473829 PLPP2O43688 288 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 IGLV3-1P01715 115 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 ANPEPP15144 967 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 SEC61A1P61619 476 aaKnown RBP15.89■□□□□ 0.13
PTCD3-210ENST00000473829 EGR3Q06889 387 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 RCN1Q15293 331 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 ZNF829Q3KNS6 432 aaPredicted RBP15.89■□□□□ 0.13
PTCD3-210ENST00000473829 KRTAP21-3Q3LHN1 58 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 SLC25A30Q5SVS4 291 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 ZNF684Q5T5D7 378 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 GLCCI1Q86VQ1 547 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 ENTHD1Q8IYW4 607 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 C19orf18Q8NEA5 215 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 OR10H4Q8NGA5 316 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 OR51F2Q8NH61 342 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 RFKQ969G6 155 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 PAPOLGQ9BWT3 736 aaKnown RBP15.89■□□□□ 0.13
PTCD3-210ENST00000473829 FGF23Q9GZV9 251 aaPredicted RBP15.89■□□□□ 0.13
PTCD3-210ENST00000473829 SHARPINQ9H0F6 387 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 G6PC2Q9NQR9 355 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 FAM118AQ9NWS6 357 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 HIF1ANQ9NWT6 349 aa15.89■□□□□ 0.13
PTCD3-210ENST00000473829 NUFIP1Q9UHK0 495 aaKnown RBP15.89■□□□□ 0.13
PTCD3-210ENST00000473829 A0A0U1RQV5 110 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 ACOD1A6NK06 481 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 F5H0A9 414 aaPredicted RBP15.88■□□□□ 0.13
PTCD3-210ENST00000473829 TTRP02766 147 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 GRPP07492 148 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 OR2T7P0C7T2 308 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 MDH2P40926 338 aaKnown RBP15.88■□□□□ 0.13
PTCD3-210ENST00000473829 ZNF85Q03923 595 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 TMED1Q13445 227 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 OCLNQ16625 522 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 LPCAT4Q643R3 524 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 ZNF826PQ6ZT77 177 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 KLBQ86Z14 1044 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 SPICQ8N5J4 248 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 CSNK2A3Q8NEV1 391 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 OR2T27Q8NH04 317 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 OR51E1Q8TCB6 317 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 ERGIC1Q969X5 290 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 BEX2Q9BXY8 128 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 PATZ1Q9HBE1 687 aaKnown RBP15.88■□□□□ 0.13
PTCD3-210ENST00000473829 TMEM165Q9HC07 324 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 ZNF391Q9UJN7 358 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 R4GMQ9 66 aa15.88■□□□□ 0.13
PTCD3-210ENST00000473829 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.87■□□□□ 0.13
PTCD3-210ENST00000473829 LOC100130705A0A1B0GUX0 176 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 LRRC30A6NM36 301 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 CEACAM18A8MTB9 384 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 KIAA1324LA8MWY0 1029 aaPredicted RBP15.87■□□□□ 0.13
PTCD3-210ENST00000473829 LOC110117498-PIK3R3F6TDL0 507 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 ZFP36P26651 326 aaKnown RBP15.87■□□□□ 0.13
PTCD3-210ENST00000473829 PEX2P28328 305 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 MTNR1AP48039 350 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 PRDX4Q13162 271 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 LRRC36Q1X8D7 754 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 GALNT4Q8N4A0 578 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 KLHL36Q8N4N3 616 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 SPERTQ8NA61 448 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms