RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 FGF12P61328 243 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 CSNK2BP67870 215 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 BAMBIQ13145 260 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 TMEM236Q5W0B7 351 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 RUSC1-AS1Q66K80 236 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 PLBD1Q6P4A8 553 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 BTNL3Q6UXE8 466 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 LRRN1Q6UXK5 716 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 BBS1Q8NFJ9 593 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 RNF133Q8WVZ7 376 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 ERGIC1Q969X5 290 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 REEP6Q96HR9 211 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 PLEKHA8Q96JA3 519 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 LRGUKQ96M69 825 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 INTS14Q96SY0 518 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 MARCH7Q9H992 704 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 DOCK11Q5JSL3 2073 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 hCG_38984A0A1B0GV85 526 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 A6NLC8 198 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 LGALS8O00214 317 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 GLCEO94923 617 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 OPRL1P41146 370 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 HCCSP53701 268 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 GINS1Q14691 196 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 SLC9A3R2Q15599 337 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 OR8B8Q15620 311 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 GFOD2Q3B7J2 385 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 NLRC3Q7RTR2 1065 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 FAM90A1Q86YD7 464 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 TECTBQ96PL2 329 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 FGF23Q9GZV9 251 aaPredicted RBP13.84□□□□□ -0.19
USP40-212ENST00000473191 SLC22A4Q9H015 551 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 C1orf21Q9H246 121 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 PCDHGB1Q9Y5G3 927 aa13.84□□□□□ -0.19
USP40-212ENST00000473191 OOEPA6NGQ2 149 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 PHYHO14832 338 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 ADAM20O43506 726 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 XRCC2O43543 280 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 LHBP01229 141 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 TFF1P04155 84 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 HKR1P10072 659 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 HSD11B1P28845 292 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 GRB2P62993 217 aaKnown RBP13.83□□□□□ -0.2
USP40-212ENST00000473191 TIGD6Q17RP2 521 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 DEFB112Q30KQ8 113 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 RBMS3Q6XE24 437 aaKnown RBP13.83□□□□□ -0.2
USP40-212ENST00000473191 LYZL4Q96KX0 146 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 RHBDD3Q9Y3P4 386 aa13.83□□□□□ -0.2
USP40-212ENST00000473191 hCG_1807616A0A1W2PRN6 198 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 ARRDC5A6NEK1 342 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.82□□□□□ -0.2
USP40-212ENST00000473191 PPIAL4GP0DN37 164 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 MMP9P14780 707 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 CPT2P23786 658 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 ACKR3P25106 362 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 NAA10P41227 235 aaPredicted RBP13.82□□□□□ -0.2
USP40-212ENST00000473191 GSK3AP49840 483 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 CDK5Q00535 292 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 C9orf139Q6ZV77 190 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 CPOQ8IVL8 374 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 OR1M1Q8NGA1 313 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 SLC7A6OSQ96CW6 309 aaPredicted RBP13.82□□□□□ -0.2
USP40-212ENST00000473191 TBX15Q96SF7 602 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 PCGF1Q9BSM1 259 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 TNFRSF19Q9NS68 423 aa13.82□□□□□ -0.2
USP40-212ENST00000473191 AQP12BA6NM10 295 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 ANKRD30BLA7E2S9 258 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 PRR32B1ATL7 298 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 PSMD9O00233 223 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 GNGT2O14610 69 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 RNASE1P07998 156 aaKnown RBP13.81□□□□□ -0.2
USP40-212ENST00000473191 OSMP13725 252 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 AMY2BP19961 511 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 SLC2A5P22732 501 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 CFHR2P36980 270 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 SLC15A1P46059 708 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 PRB3Q04118 309 aaPredicted RBP13.81□□□□□ -0.2
USP40-212ENST00000473191 DMRTC1Q5HYR2 192 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 WDR82Q6UXN9 313 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 TRPM8Q7Z2W7 1104 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 SPATA24Q86W54 205 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 AQP12AQ8IXF9 295 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 PLPP7Q8NBV4 271 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 OR8S1Q8NH09 359 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 OTOSQ8NHW6 89 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 THEM6Q8WUY1 208 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 LRRC29Q8WV35 223 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 ERVK-18Q9QC07 812 aa13.81□□□□□ -0.2
USP40-212ENST00000473191 TRAV38-1A0A0B4J264 116 aa13.8□□□□□ -0.2
USP40-212ENST00000473191 PRR23D1E9PI22 279 aaPredicted RBP13.8□□□□□ -0.2
USP40-212ENST00000473191 DVL1O14640 695 aa13.8□□□□□ -0.2
USP40-212ENST00000473191 HOXA3O43365 443 aaPredicted RBP13.8□□□□□ -0.2
USP40-212ENST00000473191 ENSAO43768 121 aaKnown RBP13.8□□□□□ -0.2
USP40-212ENST00000473191 FKBP6O75344 327 aa13.8□□□□□ -0.2
USP40-212ENST00000473191 LYNP07948 512 aa13.8□□□□□ -0.2
USP40-212ENST00000473191 H2BFMP0C1H6 154 aa13.8□□□□□ -0.2
USP40-212ENST00000473191 PRR23D2P0DMB1 279 aaPredicted RBP13.8□□□□□ -0.2
USP40-212ENST00000473191 OMGP23515 440 aa13.8□□□□□ -0.2
USP40-212ENST00000473191 BLVRAP53004 296 aa13.8□□□□□ -0.2
USP40-212ENST00000473191 DLX1P56177 255 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms