RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 SLC39A6Q13433 755 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 TFDP1Q14186 410 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 GK3PQ14409 553 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 POU6F1Q14863 301 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 MRPL23Q16540 153 aaKnown RBP2.47□□□□□ -2.01
CD46-213ENST00000471987 ZSWIM7Q19AV6 140 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 TMEM176BQ3YBM2 270 aaPredicted RBP2.47□□□□□ -2.01
CD46-213ENST00000471987 SFT2D3Q587I9 215 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 TSPO2Q5TGU0 170 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 LPCAT4Q643R3 524 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 HACD2Q6Y1H2 254 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 DNM1P46Q6ZS02 220 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 ACOT7LQ6ZUV0 252 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 ABHD13Q7L211 337 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 APTXQ7Z2E3 356 aaKnown RBP2.47□□□□□ -2.01
CD46-213ENST00000471987 ZNF429Q86V71 674 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 C17orf82Q86X59 251 aaPredicted RBP2.47□□□□□ -2.01
CD46-213ENST00000471987 STX19Q8N4C7 294 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 FAM71E2Q8N5Q1 922 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 CDRT4Q8N9R6 151 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 INO80EQ8NBZ0 244 aaPredicted RBP2.47□□□□□ -2.01
CD46-213ENST00000471987 ZNF738Q8NE65 137 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 OR9A4Q8NGU2 314 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 OR6N2Q8NGY6 317 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 RPL3LQ92901 407 aaKnown RBP2.47□□□□□ -2.01
CD46-213ENST00000471987 PTH2Q96A98 100 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 HAUS1Q96CS2 278 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 C10orf35Q96D05 121 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 CMTM5Q96DZ9 223 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 SH3YL1Q96HL8 342 aaPredicted RBP2.47□□□□□ -2.01
CD46-213ENST00000471987 HPDLQ96IR7 371 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 RNF170Q96K19 258 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 FOPNLQ96NB1 174 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 PPP1R2P1Q96PQ5 205 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 OR2V2Q96R30 315 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 STACQ99469 402 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 COPS8Q99627 209 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 RBBP8Q99708 897 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 AIF1LQ9BQI0 150 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 TIMM29Q9BSF4 260 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 TMEM109Q9BVC6 243 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 CCDC90BQ9GZT6 254 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 OR51M1Q9H341 326 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 ZNF430Q9H8G1 570 aaPredicted RBP2.47□□□□□ -2.01
CD46-213ENST00000471987 ZDHHC11Q9H8X9 412 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 EML4Q9HC35 981 aaKnown RBP2.47□□□□□ -2.01
CD46-213ENST00000471987 ANKHQ9HCJ1 492 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 SLC2A9Q9NRM0 540 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 OR52A1Q9UKL2 312 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 ZNF490Q9ULM2 529 aaPredicted RBP2.47□□□□□ -2.01
CD46-213ENST00000471987 PRPF19Q9UMS4 504 aaKnown RBP2.47□□□□□ -2.01
CD46-213ENST00000471987 GUCA1BQ9UMX6 200 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 ARHGEF10O15013 1369 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 MSH6P52701 1360 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 KIF15Q9NS87 1388 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 KIF13AQ9H1H9 1805 aa2.47□□□□□ -2.01
CD46-213ENST00000471987 NCAPD3P42695 1498 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 UHRF1BP1Q6BDS2 1440 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 VPS8Q8N3P4 1428 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 IGHV1OR15-1A0A075B7D0 117 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 SMIM28A0A1B0GU29 152 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 A0A1B0GVI7 797 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 A0A1W2PRD5 423 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 PSMB11A5LHX3 300 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 CENPXA8MT69 81 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 hCG_2039718K7EN88 272 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 M0QZ92 97 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 PSMD12O00232 456 aaPredicted RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 CDIPTO14735 213 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 PFDN6O15212 129 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 ARPC5O15511 151 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 SGCEO43556 437 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 KLRC4O43908 158 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 AQP8O94778 261 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 NDUFA7O95182 113 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 IGKV1-17P01599 117 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 RBP1P09455 135 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 FAM228BP0C875 321 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 MYL2P10916 166 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 ANXA3P12429 323 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 ATP1B2P14415 290 aaPredicted RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 KCNE1P15382 129 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 CSNK2A2P19784 350 aaPredicted RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 RAB3AP20336 220 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 PMCHP20382 165 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 OGNP20774 298 aaKnown RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 HTR2CP28335 458 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 ERP29P30040 261 aaKnown RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 SHMT2P34897 504 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 RCVRNP35243 200 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 SSTR5P35346 364 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 RPL4P36578 427 aaKnown RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 GPX4P36969 197 aaPredicted RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 CSKP41240 450 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 YAP1P46937 504 aaKnown RBP2.46□□□□□ -2.02
CD46-213ENST00000471987 PLA2G16P53816 162 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 OR4D2P58180 307 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 CDC42P60953 191 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 RAB10P61026 200 aa2.46□□□□□ -2.02
CD46-213ENST00000471987 KCNJ2P63252 427 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms