RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ZNF101Q8IZC7 436 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 PAQR4Q8N4S7 273 aaPredicted RBP8.43□□□□□ -1.06
CCM2-204ENST00000470837 PLPP7Q8NBV4 271 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 OR1M1Q8NGA1 313 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 OR14K1Q8NGZ2 314 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 DYNC2LI1Q8TCX1 351 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 ITLN2Q8WWU7 325 aaPredicted RBP8.43□□□□□ -1.06
CCM2-204ENST00000470837 SPSB4Q96A44 273 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 SLC25A46Q96AG3 418 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 FOXRED1Q96CU9 486 aaPredicted RBP8.43□□□□□ -1.06
CCM2-204ENST00000470837 LYZL4Q96KX0 146 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 DACH2Q96NX9 599 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 REPIN1Q9BWE0 567 aaKnown RBP8.43□□□□□ -1.06
CCM2-204ENST00000470837 PAPOLGQ9BWT3 736 aaKnown RBP8.43□□□□□ -1.06
CCM2-204ENST00000470837 PLGRKTQ9HBL7 147 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 TMEM138Q9NPI0 162 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 TAS2R4Q9NYW5 299 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 KCNN3Q9UGI6 736 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 SLC7A11Q9UPY5 501 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 V9GY05 133 aa8.43□□□□□ -1.06
CCM2-204ENST00000470837 ARHGAP21Q5T5U3 1957 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 NBEAQ8NFP9 2946 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 hCG_38984A0A1B0GV85 526 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 A6NIN4 97 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 CD300LBA8K4G0 201 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 PIN1P1O15428 100 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 SULT1B1O43704 296 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 TIMM8AO60220 97 aaPredicted RBP8.42□□□□□ -1.06
CCM2-204ENST00000470837 TMEM127O75204 238 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 NRASP01111 189 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 IGLV3-1P01715 115 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 CD3EP07766 207 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 EPXP11678 715 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 RAC2P15153 192 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 PRKACBP22694 351 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 SPOCK1Q08629 439 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 SNTB2Q13425 540 aaKnown RBP8.42□□□□□ -1.06
CCM2-204ENST00000470837 HLXQ14774 488 aaPredicted RBP8.42□□□□□ -1.06
CCM2-204ENST00000470837 OR8B8Q15620 311 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 MOGQ16653 247 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 ZNF404Q494X3 552 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 CEP78Q5JTW2 689 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 IDNKQ5T6J7 187 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 FBXW12Q6X9E4 464 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 UTS2BQ765I0 119 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 MYPOPQ86VE0 399 aaPredicted RBP8.42□□□□□ -1.06
CCM2-204ENST00000470837 JAGN1Q8N5M9 183 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 PNLDC1Q8NA58 520 aaKnown RBP8.42□□□□□ -1.06
CCM2-204ENST00000470837 OR56B2PQ8NGI1 322 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 OR13C9Q8NGT0 318 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 MCFD2Q8NI22 146 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 ZNF671Q8TAW3 534 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 SLC25A40Q8TBP6 338 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 ACOT12Q8WYK0 555 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 PIGCQ92535 297 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 CMBLQ96DG6 245 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 ADAT3Q96EY9 351 aaPredicted RBP8.42□□□□□ -1.06
CCM2-204ENST00000470837 CEP19Q96LK0 163 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 GPER1Q99527 375 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 OR2J1Q9GZK6 312 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 CHST5Q9GZS9 411 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 C6orf62Q9GZU0 229 aaPredicted RBP8.42□□□□□ -1.06
CCM2-204ENST00000470837 PPIL3Q9H2H8 161 aaKnown RBP8.42□□□□□ -1.06
CCM2-204ENST00000470837 ABCB9Q9NP78 766 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 NPAP1Q9NZP6 1156 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 DAPK2Q9UIK4 370 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 GPR160Q9UJ42 338 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 NOP16Q9Y3C1 178 aaKnown RBP8.42□□□□□ -1.06
CCM2-204ENST00000470837 AK6Q9Y3D8 172 aaKnown RBP8.42□□□□□ -1.06
CCM2-204ENST00000470837 ATP23Q9Y6H3 246 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 SHANK1Q9Y566 2161 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 CACNA1CQ13936 2221 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 COL6A6A6NMZ7 2263 aa8.42□□□□□ -1.06
CCM2-204ENST00000470837 IGSF10Q6WRI0 2623 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 FREM1Q5H8C1 2179 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 TRAV8-7A0A075B6U6 113 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.41□□□□□ -1.06
CCM2-204ENST00000470837 SMIM30A4D0T7 59 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 C5orf63A6NC05 138 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 TRIM64BA6NI03 449 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 ATP6V1G2-DDX39BF2Z307 99 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 ABCD4O14678 606 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 RGS5O15539 181 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 LMX1BO60663 402 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 C1QL1O75973 258 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 CLPXO76031 633 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 NCR1O76036 304 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 CLEC2LP0C7M8 214 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 CALCRP30988 508 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 KIR2DL3P43628 341 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 FABP6P51161 128 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 CAPZA1P52907 286 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 BSPH1Q075Z2 132 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 RAB11BQ15907 218 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 BEX5Q5H9J7 111 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 DDI2Q5TDH0 399 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 PLCXD3Q63HM9 321 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 SFXN4Q6P4A7 337 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 VHLLQ6RSH7 139 aa8.41□□□□□ -1.06
CCM2-204ENST00000470837 MOB3CQ70IA8 216 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms