RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, human

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD3-208	ENST00000470045	DVL3	Q92997	716 aa	Predicted RBP	11.76	□□□□□ -0.53
COMMD3-208	ENST00000470045	NEIL1	Q96FI4	390 aa	Predicted RBP	11.76	□□□□□ -0.53
COMMD3-208	ENST00000470045	REEP6	Q96HR9	211 aa		11.76	□□□□□ -0.53
COMMD3-208	ENST00000470045	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.76	□□□□□ -0.53
COMMD3-208	ENST00000470045	RGCC	Q9H4X1	137 aa		11.76	□□□□□ -0.53
COMMD3-208	ENST00000470045	FN3KRP	Q9HA64	309 aa		11.76	□□□□□ -0.53
COMMD3-208	ENST00000470045	UFSP2	Q9NUQ7	469 aa		11.76	□□□□□ -0.53
COMMD3-208	ENST00000470045	DNAJC27	Q9NZQ0	273 aa		11.76	□□□□□ -0.53
COMMD3-208	ENST00000470045	MIOX	Q9UGB7	285 aa		11.76	□□□□□ -0.53
COMMD3-208	ENST00000470045	AP4S1	Q9Y587	144 aa		11.76	□□□□□ -0.53
COMMD3-208	ENST00000470045	VENTX	O95231	258 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	FAS	P25445	335 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	PSMB10	P40306	273 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	EFNB1	P98172	346 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	ZNF154	Q13106	437 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	OR8B8	Q15620	311 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	SLX4IP	Q5VYV7	408 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	THEM6	Q8WUY1	208 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	ZFAND2B	Q8WV99	257 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	TEAD3	Q99594	435 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	PRRG3	Q9BZD7	231 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	YIPF3	Q9GZM5	350 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	OR10A2	Q9H208	303 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	NIPAL2	Q9H841	368 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	KRT84	Q9NSB2	600 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	TVP23B	Q9NYZ1	205 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	RNF7	Q9UBF6	113 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	OR5V1	Q9UGF6	321 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	N6AMT1	Q9Y5N5	214 aa		11.75	□□□□□ -0.53
COMMD3-208	ENST00000470045	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	ZAR1L	A6NP61	321 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	ANKRD30BL	A7E2S9	258 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045		G3V2T6	193 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	PRKY	O43930	277 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	MITF	O75030	526 aa	Predicted RBP	11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	FCGR1A	P12314	374 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	EPHA2	P29317	976 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	GSK3A	P49840	483 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	HILS1	P60008	231 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	RPS7	P62081	194 aa	Known RBP	11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	HOXA4	Q00056	320 aa	Predicted RBP	11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	MZT1	Q08AG7	82 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	LCN1P1	Q5VSP4	162 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	C12orf73	Q69YU5	71 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	DEGS2	Q6QHC5	323 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	LYPD2	Q6UXB3	125 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	LRRN1	Q6UXK5	716 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	ASRGL1	Q7L266	308 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	WDR86	Q86TI4	376 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	ZDHHC13	Q8IUH4	622 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	OR8B3	Q8NGG8	313 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	ZNF418	Q8TF45	676 aa	Predicted RBP	11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	PGAM5	Q96HS1	289 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	OR8B2	Q96RD0	313 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	C14orf119	Q9NWQ9	140 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	ZNF391	Q9UJN7	358 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	LRP12	Q9Y561	859 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	FBN3	Q75N90	2809 aa		11.74	□□□□□ -0.53
COMMD3-208	ENST00000470045	IGHV2-70D	A0A0C4DH43	119 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	LGALS8	O00214	317 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	PHYH	O14832	338 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	TNFRSF13B	O14836	293 aa	Predicted RBP	11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	LHB	P01229	141 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	PPIAL4G	P0DN37	164 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	PITPNB	P48739	271 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	GNB2	P62879	340 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	ROM1	Q03395	351 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	PAX8	Q06710	450 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	KLF17	Q5JT82	389 aa	Predicted RBP	11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	AADACL4	Q5VUY2	407 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	ZNF841	Q6ZN19	808 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	NLRC3	Q7RTR2	1065 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	KRT74	Q7RTS7	529 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	AMIGO2	Q86SJ2	522 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	GCSAM	Q8N6F7	178 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	C19orf18	Q8NEA5	215 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	CSNK2A3	Q8NEV1	391 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	OR8B12	Q8NGG6	310 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	LRTOMT	Q8WZ04	291 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	ZDHHC16	Q969W1	377 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	LYZL4	Q96KX0	146 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	BRD7	Q9NPI1	651 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	C1orf123	Q9NWV4	160 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	LAMP5	Q9UJQ1	280 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	AUP1	Q9Y679	476 aa		11.73	□□□□□ -0.53
COMMD3-208	ENST00000470045	ACOD1	A6NK06	481 aa		11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	PRR32	B1ATL7	298 aa		11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045		M0R129	80 aa		11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	ACKR3	P25106	362 aa		11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	DCTD	P32321	178 aa		11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	CD80	P33681	288 aa		11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	HCCS	P53701	268 aa		11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	SNCB	Q16143	134 aa		11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	GFOD2	Q3B7J2	385 aa		11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	NXNL2	Q5VZ03	156 aa		11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	WDR25	Q64LD2	544 aa	Predicted RBP	11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	KCTD18	Q6PI47	426 aa	Predicted RBP	11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	ZNF826P	Q6ZT77	177 aa		11.72	□□□□□ -0.53
COMMD3-208	ENST00000470045	KRT77	Q7Z794	578 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms