RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SFT2D2O95562 160 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 CDAP32320 146 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 ALDH3B1P43353 468 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 OR3A4PP47883 348 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 ATXN7L3Q14CW9 347 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-209ENST00000470026 ELP2Q6IA86 826 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 CRIP3Q6Q6R5 217 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 DOK3Q7L591 496 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 ABHD12BQ7Z5M8 362 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-209ENST00000470026 CCDC36Q8IYA8 594 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 SLC30A7Q8NEW0 376 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 OR4K17Q8NGC6 315 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 CA14Q9ULX7 337 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 ARID1BQ8NFD5 2236 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-209ENST00000470026 FAM25EA8MYX2 175 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 EEF1E1-BLOC1S5C9J1V9 151 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 F5H0A9 414 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-209ENST00000470026 ZFAND5O76080 213 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 MPIG6BO95866 241 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 PRF1P14222 555 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 CBX5P45973 191 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 SHBQ15464 509 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 Q6ZSR3 168 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 KCTD9Q7L273 389 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 CPEB2Q7Z5Q1 589 aaKnown RBP12.05□□□□□ -0.48
BRCA1-209ENST00000470026 FADS6Q8N9I5 356 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 OR10G3Q8NGC4 313 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 OR14K1Q8NGZ2 314 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 SPACA5Q96QH8 159 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 PHF7Q9BWX1 381 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-209ENST00000470026 TMEM59Q9BXS4 323 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 ZNF576Q9H609 170 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 SEC61A2Q9H9S3 476 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 RAB18Q9NP72 206 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 CYTL1Q9NRR1 136 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 ASH2LQ9UBL3 628 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 CSAG2Q9Y5P2 127 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 RALGAPA1Q6GYQ0 2036 aa12.05□□□□□ -0.48
BRCA1-209ENST00000470026 IGKV1-9A0A0C4DH69 117 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 ABCD4O14678 606 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 RER1O15258 196 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 CD79AP11912 226 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 FPR2P25090 351 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 ADH6P28332 368 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 AFF3P51826 1226 aaKnown RBP12.04□□□□□ -0.48
BRCA1-209ENST00000470026 GRB2P62993 217 aaKnown RBP12.04□□□□□ -0.48
BRCA1-209ENST00000470026 OR56B1Q8NGI3 324 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 OR1S2Q8NGQ3 325 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 SLC25A43Q8WUT9 341 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-209ENST00000470026 LRRC46Q96FV0 321 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 SLC7A5P2Q9GIP4 190 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 GHRLQ9UBU3 117 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 ATXN7L1Q9ULK2 861 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-209ENST00000470026 PCDHB10Q9UN67 800 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 POLR1DQ9Y2S0 133 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 HDGFL3Q9Y3E1 203 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 AQP7P3A6NL99 342 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 H0YIZ8 118 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 BCAT2O15382 392 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-209ENST00000470026 PGAM2P15259 253 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 FKBP2P26885 142 aaKnown RBP12.04□□□□□ -0.48
BRCA1-209ENST00000470026 ZNF133P52736 654 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-209ENST00000470026 SUPT4H1P63272 117 aaKnown RBP12.04□□□□□ -0.48
BRCA1-209ENST00000470026 DCDP81605 110 aaKnown RBP12.04□□□□□ -0.48
BRCA1-209ENST00000470026 MC2RQ01718 297 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 STK11Q15831 433 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 RHBDD1Q8TEB9 315 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 TMEM41AQ96HV5 264 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 SCGB3A2Q96PL1 93 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 SPSB2Q99619 263 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 RTBDNQ9BSG5 229 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-209ENST00000470026 METTL7AQ9H8H3 244 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 OSGIN2Q9Y236 505 aa12.04□□□□□ -0.48
BRCA1-209ENST00000470026 CEP290O15078 2479 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 A0A1W2PNR3 127 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 C5orf51A6NDU8 294 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 ATP6V1G2-DDX39BF2Z307 99 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 RAMP1O60894 148 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 H2AFB1P0C5Y9 115 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 SLC2A1P11166 492 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 NAT2P11245 290 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 TPT1P13693 172 aaKnown RBP12.03□□□□□ -0.48
BRCA1-209ENST00000470026 PNLIPP16233 465 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 LSM6P62312 80 aaKnown RBP12.03□□□□□ -0.48
BRCA1-209ENST00000470026 IL15RAQ13261 267 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 CLEC18BQ6UXF7 455 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 FOXL2NBQ6ZUU3 175 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 ZSCAN4Q8NAM6 433 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-209ENST00000470026 RRNAD1Q96FB5 475 aaKnown RBP12.03□□□□□ -0.48
BRCA1-209ENST00000470026 ARHGAP5-AS1Q96IT6 56 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 URM1Q9BTM9 101 aaKnown RBP12.03□□□□□ -0.48
BRCA1-209ENST00000470026 BANF2Q9H503 90 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 FLVCR1Q9Y5Y0 555 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 USP34Q70CQ2 3546 aa12.03□□□□□ -0.48
BRCA1-209ENST00000470026 A0A1W2PP11 408 aa12.02□□□□□ -0.48
BRCA1-209ENST00000470026 TMEM218A2RU14 115 aa12.02□□□□□ -0.48
BRCA1-209ENST00000470026 OR2J2O76002 312 aa12.02□□□□□ -0.48
BRCA1-209ENST00000470026 CYC1P08574 325 aa12.02□□□□□ -0.48
BRCA1-209ENST00000470026 QDPRP09417 244 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms