RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZNF584Q8IVC4 421 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 CISD2Q8N5K1 135 aaKnown RBP15.75■□□□□ 0.11
SMC4-211ENST00000469858 NPRL2Q8WTW4 380 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 PP6455Q8WZ26 134 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 GCDHQ92947 438 aaPredicted RBP15.75■□□□□ 0.11
SMC4-211ENST00000469858 CHST5Q9GZS9 411 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 C11orf54Q9H0W9 315 aaPredicted RBP15.75■□□□□ 0.11
SMC4-211ENST00000469858 RGCCQ9H4X1 137 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 BSNQ9UPA5 3926 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 CIB4A0PJX0 185 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 CTAG2O75638 210 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 CD3GP09693 182 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 RFX2P48378 723 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 ZNF92Q03936 586 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 OR10K2Q6IF99 312 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 MTFR2Q6P444 385 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 CCBE1Q6UXH8 406 aaPredicted RBP15.75■□□□□ 0.11
SMC4-211ENST00000469858 MDP1Q86V88 176 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 C10orf35Q96D05 121 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 MS4A3Q96HJ5 214 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 ZNF391Q9UJN7 358 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 FAM215AQ9Y5M1 114 aa15.75■□□□□ 0.11
SMC4-211ENST00000469858 IGF2RP11717 2491 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 XRCC2O43543 280 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 TNFSF13O75888 250 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 CNOT4O95628 575 aaKnown RBP15.74■□□□□ 0.11
SMC4-211ENST00000469858 PTH2RP49190 550 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 TAS2R20P59543 309 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 TSC22D1Q15714 1073 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 UBE2V2Q15819 145 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 C1orf185Q5T7R7 199 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 C3P1Q6ZMU1 363 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 COLCA1Q6ZS62 124 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 BIVMQ86UB2 503 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 RPRMLQ8N4K4 120 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 POM121L2Q96KW2 1035 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 GAL3ST1Q99999 423 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 ATG5Q9H1Y0 275 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 AUNIPQ9H7T9 357 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 RABL2AQ9UBK7 228 aaPredicted RBP15.74■□□□□ 0.11
SMC4-211ENST00000469858 RABL2BQ9UNT1 228 aa15.74■□□□□ 0.11
SMC4-211ENST00000469858 A0A1W2PR80 420 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 DHRS7CA6NNS2 312 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 CTDSPLO15194 276 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 TOXO94900 526 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 KDM4BO94953 1096 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 APLNRP35414 380 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 MAP2K3P46734 347 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 ID4P47928 161 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 RIPPLY1Q0D2K3 151 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 TNK1Q13470 666 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 AWAT2Q6E213 333 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 UTS2BQ765I0 119 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 AKAP1Q92667 903 aaKnown RBP eCLIP15.73■□□□□ 0.114e-24■■■■■ 140.6
SMC4-211ENST00000469858 YIPF5Q969M3 257 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 PHF21AQ96BD5 680 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 GPER1Q99527 375 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 SLC22A4Q9H015 551 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 PROCRQ9UNN8 238 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 hCG_38984A0A1B0GV85 526 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 PTHLHP12272 177 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 PTGER4P35408 488 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 GSK3AP49840 483 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 UBE2NP61088 152 aaKnown RBP15.73■□□□□ 0.11
SMC4-211ENST00000469858 FAM3AP98173 230 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 ANGPTL5Q86XS5 388 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 FAM57AQ8TBR7 257 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 SMIM4Q8WVI0 70 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 NEDD4LQ96PU5 975 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 DIABLOQ9NR28 239 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 PLSCR4Q9NRQ2 329 aa15.73■□□□□ 0.11
SMC4-211ENST00000469858 LDLRAD4O15165 306 aa15.72■□□□□ 0.11
SMC4-211ENST00000469858 XRCC3O43542 346 aa15.72■□□□□ 0.11
SMC4-211ENST00000469858 ALDOBP05062 364 aa15.72■□□□□ 0.11
SMC4-211ENST00000469858 OR3A4PP47883 348 aa15.72■□□□□ 0.11
SMC4-211ENST00000469858 TDGF1P3P51864 188 aa15.72■□□□□ 0.11
SMC4-211ENST00000469858 CAPZA1P52907 286 aa15.72■□□□□ 0.11
SMC4-211ENST00000469858 GABRA6Q16445 453 aa15.72■□□□□ 0.11
SMC4-211ENST00000469858 KRT74Q7RTS7 529 aa15.72■□□□□ 0.11
SMC4-211ENST00000469858 STARD4Q96DR4 205 aa15.72■□□□□ 0.11
SMC4-211ENST00000469858 OPN3Q9H1Y3 402 aaPredicted RBP15.72■□□□□ 0.11
SMC4-211ENST00000469858 GPR173Q9NS66 373 aa15.72■□□□□ 0.11
SMC4-211ENST00000469858 GGT3PA6NGU5 568 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 LYRM1O43325 122 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 GSTZ1O43708 216 aaPredicted RBP15.71■□□□□ 0.11
SMC4-211ENST00000469858 PFDN1O60925 122 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 BPNT1O95861 308 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 IL2RAP01589 272 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 PRF1P14222 555 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 COX5AP20674 150 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
SMC4-211ENST00000469858 SRP9P49458 86 aaKnown RBP15.71■□□□□ 0.11
SMC4-211ENST00000469858 LINC00303Q3SY05 128 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 CDH26Q8IXH8 852 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 GABRG1Q8N1C3 465 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 ZNF610Q8N9Z0 462 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 NAXEQ8NCW5 288 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 SSC4DQ8WTU2 575 aa15.71■□□□□ 0.11
SMC4-211ENST00000469858 SNRNP27Q8WVK2 155 aaKnown RBP15.71■□□□□ 0.11
SMC4-211ENST00000469858 PIGTQ969N2 578 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms