RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ZFPL1O95159 310 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 CCL1P22362 96 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 CCR9P51686 369 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 SELENOVP59797 346 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 KCTD21Q4G0X4 260 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 SPRNQ5BIV9 151 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 COMMD2Q86X83 199 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 SPARTQ8N0X7 666 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 PLPP7Q8NBV4 271 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 OR8G5Q8NG78 346 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 OR51A4Q8NGJ6 313 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 SORCS2Q96PQ0 1159 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 MYCBPQ99417 103 aaPredicted RBP12.6□□□□□ -0.39
COL9A3-209ENST00000469852 RGCCQ9H4X1 137 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 DYNLRB1Q9NP97 96 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 AKAP9Q99996 3911 aa12.6□□□□□ -0.39
COL9A3-209ENST00000469852 VPS13CQ709C8 3753 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 CHD3Q12873 2000 aaKnown RBP12.59□□□□□ -0.39
COL9A3-209ENST00000469852 TRBV2A0A0J9YWF9 115 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 A6NIN4 97 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 MLNRO43193 412 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 IGHV1-46P01743 117 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 HLA-DPB1P04440 258 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 PCMT1P22061 227 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 MAGEB1P43366 347 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 PPOXP50336 477 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 EMX1Q04741 257 aaPredicted RBP12.59□□□□□ -0.39
COL9A3-209ENST00000469852 MRPL28Q13084 256 aaKnown RBP12.59□□□□□ -0.39
COL9A3-209ENST00000469852 HNRNPA0Q13151 305 aaKnown RBP12.59□□□□□ -0.39
COL9A3-209ENST00000469852 SPHARQ15513 63 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 MED22Q15528 200 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 TBCEQ15813 527 aaPredicted RBP12.59□□□□□ -0.39
COL9A3-209ENST00000469852 CCDC58Q4VC31 144 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 DMKNQ6E0U4 476 aaPredicted RBP12.59□□□□□ -0.39
COL9A3-209ENST00000469852 RPL22L1Q6P5R6 122 aaKnown RBP12.59□□□□□ -0.39
COL9A3-209ENST00000469852 Q6ZSR3 168 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 CDH24Q86UP0 819 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 OR13C5Q8NGS8 318 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 OR14K1Q8NGZ2 314 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 VRK1Q99986 396 aaPredicted RBP12.59□□□□□ -0.39
COL9A3-209ENST00000469852 SLC30A2Q9BRI3 323 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 OPA3Q9H6K4 179 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 ACOT13Q9NPJ3 140 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 TRIM36Q9NQ86 728 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 RHBDD3Q9Y3P4 386 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 V9GYS6 101 aa12.59□□□□□ -0.39
COL9A3-209ENST00000469852 C17orf100A8MU93 164 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 H7C417 338 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 SPRY3O43610 288 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 NCR1O76036 304 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 LY6HO94772 140 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 UBCP0CG48 685 aaKnown RBP12.58□□□□□ -0.4
COL9A3-209ENST00000469852 SELEP16581 610 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 FAHP16930 419 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 CA6P23280 308 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 CFL1P23528 166 aaKnown RBP12.58□□□□□ -0.4
COL9A3-209ENST00000469852 RBMXP38159 391 aaKnown RBP12.58□□□□□ -0.4
COL9A3-209ENST00000469852 ZNF81P51508 661 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 SLC3A1Q07837 685 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 DMRTC1Q5HYR2 192 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 ZNF773Q6PK81 442 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 ZNF676Q8N7Q3 588 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 OR10AD1Q8NGE0 317 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 OR5AK2Q8NH90 309 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 SMIM19Q96E16 107 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 PGLYRP3Q96LB9 341 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 GPR160Q9UJ42 338 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 ZNF391Q9UJN7 358 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 PMF1-BGLAPU3KQ54 211 aa12.58□□□□□ -0.4
COL9A3-209ENST00000469852 A0A1B0GVI7 797 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 A0A1B0GWJ7 208 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 LOC390937A0A1W2PQ73 354 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 PLSCR5A0PG75 271 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 TMEM212A6NML5 194 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 SYT7O43581 403 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 MRPS14O60783 128 aaKnown RBP12.57□□□□□ -0.4
COL9A3-209ENST00000469852 DHRS3O75911 302 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 TNFAIP8O95379 198 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 IGHV4-39P01824 125 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 ISG15P05161 165 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 CELP19835 753 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 ACHEP22303 614 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 DNASE1P24855 282 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 ACSM1Q08AH1 577 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 TSTQ16762 297 aaKnown RBP12.57□□□□□ -0.4
COL9A3-209ENST00000469852 TMEM244Q5VVB8 128 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 DOK3Q7L591 496 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 SEMA6DQ8NFY4 1073 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 OR2Z1Q8NG97 314 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 HAVCR2Q8TDQ0 301 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 PIGTQ969N2 578 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 OPALINQ96PE5 141 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 FGF23Q9GZV9 251 aaPredicted RBP12.57□□□□□ -0.4
COL9A3-209ENST00000469852 ZNF696Q9H7X3 374 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 ZNF701Q9NV72 531 aaPredicted RBP12.57□□□□□ -0.4
COL9A3-209ENST00000469852 PIGLQ9Y2B2 252 aa12.57□□□□□ -0.4
COL9A3-209ENST00000469852 CELSR1Q9NYQ6 3014 aa12.56□□□□□ -0.4
COL9A3-209ENST00000469852 F8P00451 2351 aa12.56□□□□□ -0.4
COL9A3-209ENST00000469852 IGHV3-64DA0A0J9YX35 117 aa12.56□□□□□ -0.4
COL9A3-209ENST00000469852 F5H5P2 479 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms