RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 DUX4L3P0CJ86 424 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 DUX4L4P0CJ87 422 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 DUX4L5P0CJ88 424 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 DUX4L6P0CJ89 424 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 DUX4L7P0CJ90 424 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 SLC2A1P11166 492 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 PRKXP51817 358 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 MZT1Q08AG7 82 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 DUX4L9Q6RFH8 374 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-207ENST00000469093 METAP1DQ6UB28 335 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-207ENST00000469093 LYPD4Q6UWN0 246 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 PIGWQ7Z7B1 504 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 WDR86Q86TI4 376 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 CYB561A3Q8NBI2 242 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 FAM110DQ8TAY7 271 aaPredicted RBP10.07□□□□□ -0.8
COL5A1-207ENST00000469093 ST8SIA4Q92187 359 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 KCNJ15Q99712 375 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 SEMA6AQ9H2E6 1030 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 GORASP2Q9H8Y8 452 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 RNPEPL1Q9HAU8 725 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 DUX4Q9UBX2 424 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 N6AMT1Q9Y5N5 214 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 V9GYQ6 96 aa10.07□□□□□ -0.8
COL5A1-207ENST00000469093 NOTCH3Q9UM47 2321 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-207ENST00000469093 MUC1P15941 1255 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-207ENST00000469093 AMY2BP19961 511 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 IFNGR2P38484 337 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 DDOSTP39656 456 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 SPIBQ01892 262 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 PRB3Q04118 309 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-207ENST00000469093 TSPAN31Q12999 210 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 PCK2Q16822 640 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 MICBQ29980 383 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 WDR38Q5JTN6 314 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 DCXRQ7Z4W1 244 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 RNF148Q8N7C7 305 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 PROKR2Q8NFJ6 384 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 OR51L1Q8NGJ5 315 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 OR2T4Q8NH00 348 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 GNPDA2Q8TDQ7 276 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 NPRL2Q8WTW4 380 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 LRRC29Q8WV35 223 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 LRTOMTQ8WZ04 291 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 SPSB4Q96A44 273 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 SGK3Q96BR1 496 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 SEH1LQ96EE3 360 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 DMRTB1Q96MA1 342 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 COPS4Q9BT78 406 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 EGLN3Q9H6Z9 239 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 PPP1R3EQ9H7J1 279 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 CENPMQ9NSP4 180 aa10.06□□□□□ -0.8
COL5A1-207ENST00000469093 ANKRD30BLA7E2S9 258 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 RNASEK-C17orf49H0YIS7 233 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 ZNF593O00488 134 aaPredicted RBP10.05□□□□□ -0.8
COL5A1-207ENST00000469093 GMNNO75496 209 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 FBP1P09467 338 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 GRK5P34947 590 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 TGFBR2P37173 567 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 TGM4P49221 684 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 DLX1P56177 255 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 CBX1P83916 185 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 FAM3AP98173 230 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 TAF13Q15543 124 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 DHRS7BQ6IAN0 325 aaPredicted RBP10.05□□□□□ -0.8
COL5A1-207ENST00000469093 PGBD2Q6P3X8 592 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 WDR82Q6UXN9 313 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 SLC16A9Q7RTY1 509 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 DPY19L4Q7Z388 723 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 ZDHHC21Q8IVQ6 265 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 FAM216BQ8N7L0 139 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 Q8N7P7 452 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 ZNF511Q8NB15 262 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 OR1M1Q8NGA1 313 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 OR5T2Q8NGG2 359 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 OR4C15Q8NGM1 316 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 OR8S1Q8NH09 359 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 SLAMF6Q96DU3 332 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 OPA3Q9H6K4 179 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 SPAG4Q9NPE6 437 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 SIRT7Q9NRC8 400 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 ZNRD1Q9P1U0 126 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 ONECUT1Q9UBC0 465 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 VPREB3Q9UKI3 123 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 CAB39Q9Y376 341 aaPredicted RBP10.05□□□□□ -0.8
COL5A1-207ENST00000469093 COMMD3-BMI1R4GMX3 469 aa10.05□□□□□ -0.8
COL5A1-207ENST00000469093 PRKDCP78527 4128 aaKnown RBP10.05□□□□□ -0.8
COL5A1-207ENST00000469093 ACOT8O14734 319 aa10.04□□□□□ -0.8
COL5A1-207ENST00000469093 CDIPTO14735 213 aa10.04□□□□□ -0.8
COL5A1-207ENST00000469093 NPFFO15130 113 aa10.04□□□□□ -0.8
COL5A1-207ENST00000469093 GPR37O15354 613 aa10.04□□□□□ -0.8
COL5A1-207ENST00000469093 XRCC2O43543 280 aa10.04□□□□□ -0.8
COL5A1-207ENST00000469093 NDUFB3O43676 98 aa10.04□□□□□ -0.8
COL5A1-207ENST00000469093 SPARCP09486 303 aa10.04□□□□□ -0.8
COL5A1-207ENST00000469093 EEF1B2P24534 225 aaKnown RBP10.04□□□□□ -0.8
COL5A1-207ENST00000469093 RRM2P31350 389 aa10.04□□□□□ -0.8
COL5A1-207ENST00000469093 MSX2P35548 267 aaPredicted RBP10.04□□□□□ -0.8
COL5A1-207ENST00000469093 ENTPD1P49961 510 aa10.04□□□□□ -0.8
COL5A1-207ENST00000469093 HMGA2P52926 109 aa10.04□□□□□ -0.8
COL5A1-207ENST00000469093 CSNK2BP67870 215 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms