RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ZNF106Q9H2Y7 1883 aaKnown RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 LTBP1Q14766 1721 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TRBV23OR9-2A0A075B6M9 112 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 LOC100509620A0A075B734 347 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 A0A087WUU8 490 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TGIF2-C20orf24A0A0A6YYL0 155 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 CXorf51AA0A1B0GTR3 108 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 SMIM28A0A1B0GU29 152 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 A0A1B0GV72 72 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 A0A1W2PPE2 198 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 A0A1W2PS29 197 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 A6NIN4 97 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 DUXAA6NLW8 204 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 CEACAM18A8MTB9 384 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 IQCF5A8MTL0 148 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 AHRRA9YTQ3 701 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 F6UZH7 168 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 CCSO14618 274 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 PRICKLE3O43900 615 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 CTAG2O75638 210 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TOX4O94842 621 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 HPRT1P00492 218 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 AMBPP02760 352 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TRGC2P03986 189 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 PLA2G1BP04054 148 aaKnown RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 AMY2AP04746 511 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ARG1P05089 322 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 CSN2P05814 226 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 IGFBP1P08833 259 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 SNRPCP09234 159 aaKnown RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 CTXN2P0C2S0 81 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 NBEAP1P0C6P0 100 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 FGF5P12034 268 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 AMY2BP19961 511 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TACR2P21452 398 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 EDNRAP25101 427 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 LMO1P25800 156 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ACRV1P26436 265 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 CST5P28325 142 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 EPHA8P29322 1005 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 SOAT1P35610 550 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 OPRD1P41143 372 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 FRKP42685 505 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 P2RY1P47900 373 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 NPY4RP50391 375 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 RAB7AP51149 207 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 NOVA1P51513 510 aaKnown RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 PRKAG1P54619 331 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 MTCP1P56278 107 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TAS2R50P59544 299 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 UBE2NP61088 152 aaKnown RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ARF5P84085 180 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 RASGEF1BQ0VAM2 473 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TUSC3Q13454 348 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ACSF3Q4G176 576 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 VWA1Q6PCB0 445 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 DNM1P34Q6PK57 102 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 CLEC18BQ6UXF7 455 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TOMM20LQ6UXN7 152 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 FRRS1Q6ZNA5 592 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 PAQR9Q6ZVX9 377 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ERN2Q76MJ5 926 aaKnown RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 FAM220AQ7Z4H9 259 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 C5orf24Q7Z6I8 188 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TMCO2Q7Z6W1 182 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 BIVMQ86UB2 503 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 GKN2Q86XP6 184 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF584Q8IVC4 421 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 C20orf196Q8IYI0 205 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF100Q8IYN0 542 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 PRSS58Q8IYP2 241 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 PNKDQ8N490 385 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 RNF175Q8N4F7 328 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 SIRT6Q8N6T7 355 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 C10orf53Q8N6V4 93 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF615Q8N8J6 731 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 BOLLQ8N9W6 283 aaKnown RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 LINC01356Q8N9X3 169 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 RCBTB1Q8NDN9 531 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 NOXO1Q8NFA2 376 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 OR4D9Q8NGE8 314 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 OR4B1Q8NGF8 309 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 OR51L1Q8NGJ5 315 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 OR13C5Q8NGS8 318 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 OR5B3Q8NH48 314 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 Q8WTZ3 238 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 RGP1Q92546 391 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 PSMG2Q969U7 264 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF707Q96C28 371 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 CTHRC1Q96CG8 243 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 RASD2Q96D21 266 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 SEH1LQ96EE3 360 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 SLC35A4Q96G79 324 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 LRRC3BQ96PB8 259 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 DERL3Q96Q80 235 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TP53RKQ96S44 253 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 P2RX4Q99571 388 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TIMP4Q99727 224 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ARHGDIGQ99819 225 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 SYT3Q9BQG1 590 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms