RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TMEM14AQ9Y6G1 99 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 COX11Q9Y6N1 276 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 PHF3Q92576 2039 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 PIEZO2Q9H5I5 2752 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CACNA1BQ00975 2339 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CACNA1GO43497 2377 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 A0A1B0GUH1 482 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 IQCMA0A1B0GVH7 501 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 A8MXE2 369 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 H3BSA7 217 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 M0R1B8 84 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 SGCEO43556 437 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 UBL3O95164 117 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 TNFRSF6BO95407 300 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 LALBAP00709 142 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 LCATP04180 440 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 TFAP2AP05549 437 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC2A1P11166 492 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 CELP19835 753 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 PCMT1P22061 227 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 APLNRP35414 380 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ARR3P36575 388 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 RPL5P46777 297 aaKnown RBP3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 HTR5AP47898 357 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF83P51522 516 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF133P52736 654 aaPredicted RBP3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 NR1H2P55055 460 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 WNT4P56705 351 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 PROK1P58294 105 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 PCBD1P61457 104 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 LSM3P62310 102 aaKnown RBP3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ADORA2A-AS1P86434 159 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 PSG4Q00888 419 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 SCRN3Q0VDG4 424 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 AQP6Q13520 282 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 IRF3Q14653 427 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 GUSBP1Q15486 140 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 SPHARQ15513 63 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 GABRA6Q16445 453 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 TIGD6Q17RP2 521 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 TBRG1Q3YBR2 411 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC36A2Q495M3 483 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 PABPC1L2AQ5JQF8 200 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 TEX30Q5JUR7 227 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ELFN2Q5R3F8 820 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 GPR107Q5VW38 600 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 LIPNQ5VXI9 398 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 LIPKQ5VXJ0 399 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 XAF1Q6GPH4 301 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ARL9Q6T311 187 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 CFAP77Q6ZQR2 320 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 Q6ZT83 130 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 FOXL2NBQ6ZUU3 175 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 FAM57BQ71RH2 274 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF367Q7RTV3 350 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 GPR141Q7Z602 305 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 NAA40Q86UY6 237 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 MDP1Q86V88 176 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 SATL1Q86VE3 508 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 CLVS1Q8IUQ0 354 aaPredicted RBP3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF679Q8IYX0 411 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 RDH10Q8IZV5 341 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 GABRG1Q8N1C3 465 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 WDR31Q8NA23 367 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 RELL2Q8NC24 303 aaPredicted RBP3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 OR1F12Q8NHA8 337 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 LINC01560Q8TB33 94 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 CA5BP1Q8WTZ4 195 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ASB17Q8WXJ9 295 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 UFD1Q92890 307 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 TMEM203Q969S6 136 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 S100PBPQ96BU1 408 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 PGAM5Q96HS1 289 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 OR8B4Q96RC9 309 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 MYCBPQ99417 103 aaPredicted RBP3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 MGLLQ99685 303 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF649Q9BS31 505 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 TMED9Q9BVK6 235 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 OR2H1Q9GZK4 316 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 WNT5BQ9H1J7 359 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 OR51B6Q9H340 312 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 PIGMQ9H3S5 423 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 SAP30LQ9HAJ7 183 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 NOX3Q9HBY0 568 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 EXOSC4Q9NPD3 245 aaKnown RBP3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC17A5Q9NRA2 495 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 INPP5EQ9NRR6 644 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ACOXLQ9NUZ1 547 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 C11orf21Q9P2W6 132 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 MALT1Q9UDY8 824 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF629Q9UEG4 869 aaPredicted RBP3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 CYB5R1Q9UHQ9 305 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 FBXL3Q9UKT7 428 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC22A13Q9Y226 551 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 UBE2J1Q9Y385 318 aaPredicted RBP3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 LRP12Q9Y561 859 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 SIRT4Q9Y6E7 314 aaPredicted RBP3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 ZGRF1Q86YA3 2104 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 MGAQ8IWI9 3026 aa3.53□□□□□ -1.84
TMEM39A-204ENST00000468545 DMXL2Q8TDJ6 3036 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms