RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 RNF7Q9UBF6 113 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 NUP50Q9UKX7 468 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 OAZ3Q9UMX2 235 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 N6AMT1Q9Y5N5 214 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 HAX1O00165 279 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 FAM20BO75063 409 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 ANXA2P07355 339 aaKnown RBP15.96■□□□□ 0.15
COL7A1-207ENST00000467985 SLC2A1P11166 492 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 OSMP13725 252 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 PITPNBP48739 271 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 PAX8Q06710 450 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 TIGD6Q17RP2 521 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 PRAMEF6Q5VXH4 476 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 RBMS3Q6XE24 437 aaKnown RBP15.96■□□□□ 0.15
COL7A1-207ENST00000467985 SPATC1Q76KD6 591 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 HS3ST5Q8IZT8 346 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 ZNF454Q8N9F8 522 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 EME1Q96AY2 570 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 C9orf16Q9BUW7 83 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 UFSP2Q9NUQ7 469 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 C14orf119Q9NWQ9 140 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 CLN8Q9UBY8 286 aa15.96■□□□□ 0.15
COL7A1-207ENST00000467985 ANKRD30BLA7E2S9 258 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 PHYHO14832 338 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 PRODHO43272 600 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 TBX1O43435 398 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 PRKACGP22612 351 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 ACTG1P63261 375 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 PAX2Q02962 417 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 MPPED2Q15777 294 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 SNCBQ16143 134 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 C12orf54Q6X4T0 127 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 TIGD4Q8IY51 512 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 OR56B2PQ8NGI1 322 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 RAB40AQ8WXH6 277 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 DNAJC9Q8WXX5 260 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 CIB1Q99828 191 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 OR51V1Q9H2C8 321 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 RNPEPL1Q9HAU8 725 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 ORC6Q9Y5N6 252 aa15.95■□□□□ 0.14
COL7A1-207ENST00000467985 IGHV2-70DA0A0C4DH43 119 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 C5orf63A6NC05 138 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 NDUFA2O43678 99 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 H2BFMP0C1H6 154 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 CD80P33681 288 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 OPRL1P41146 370 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 NPY4RP50391 375 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 CDK5Q00535 292 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 FAM201AQ5SY85 155 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 PLBD1Q6P4A8 553 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-207ENST00000467985 REEP6Q96HR9 211 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 OR10A2Q9H208 303 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 RGCCQ9H4X1 137 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 DOCK11Q5JSL3 2073 aa15.94■□□□□ 0.14
COL7A1-207ENST00000467985 LGALS8O00214 317 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 ANOS1P23352 680 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 PSMB10P40306 273 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 FAM3AP98173 230 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 SLC34A1Q06495 639 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 SLC35D3Q5M8T2 416 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 SLC16A9Q7RTY1 509 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 FTMTQ8N4E7 242 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 OR8S1Q8NH09 359 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 OTOSQ8NHW6 89 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 C22orf15Q8WYQ4 148 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 SGK3Q96BR1 496 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 ZMYND19Q96E35 227 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-207ENST00000467985 RBM4BQ9BQ04 359 aaKnown RBP15.93■□□□□ 0.14
COL7A1-207ENST00000467985 KRT84Q9NSB2 600 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 C1orf123Q9NWV4 160 aa15.93■□□□□ 0.14
COL7A1-207ENST00000467985 TRAV38-1A0A0B4J264 116 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 KIR2DS1A0A191URI9 304 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 ATP6V1G2O95670 118 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 LYNP07948 512 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 COMPP49747 757 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-207ENST00000467985 ZNF121P58317 390 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-207ENST00000467985 RIPK1Q13546 671 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 LRRC36Q1X8D7 754 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 TUSC1Q2TAM9 212 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 KLHL12Q53G59 568 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 KLF17Q5JT82 389 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-207ENST00000467985 CD276Q5ZPR3 534 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 WDR25Q64LD2 544 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-207ENST00000467985 ZBTB49Q6ZSB9 765 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 FAM57BQ71RH2 274 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 PRSS45Q7RTY3 260 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 CPOQ8IVL8 374 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 CSNK2A3Q8NEV1 391 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 THEM6Q8WUY1 208 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 GCDHQ92947 438 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-207ENST00000467985 DACT3Q96B18 629 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-207ENST00000467985 OSBPL10Q9BXB5 764 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 GABARAPL1Q9H0R8 117 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 VCXQ9H320 206 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 ZMAT3Q9HA38 289 aaKnown RBP15.92■□□□□ 0.14
COL7A1-207ENST00000467985 SLC25A19Q9HC21 320 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 PAPOLBQ9NRJ5 636 aaKnown RBP15.92■□□□□ 0.14
COL7A1-207ENST00000467985 DNAJC27Q9NZQ0 273 aa15.92■□□□□ 0.14
COL7A1-207ENST00000467985 hCG_38984A0A1B0GV85 526 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms