RNA–Protein interactions for RNA: ENST00000467173.1

USP9X-206, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-206ENST00000467173 SP6Q3SY56 376 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 PLCXD3Q63HM9 321 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 CLEC2AQ6UVW9 174 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 MBOAT1Q6ZNC8 495 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 CMTM1Q8IZ96 169 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 C8orf31Q8N9H6 132 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 FAM184AQ8NB25 1140 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 OR9G4Q8NGQ1 327 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 LYPD6BQ8NI32 183 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 NUBPLQ8TB37 319 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 GPX8Q8TED1 209 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 CAPSLQ8WWF8 208 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 DCPSQ96C86 337 aaKnown RBP1.3□□□□□ -2.2
USP9X-206ENST00000467173 ZBED3Q96IU2 234 aaPredicted RBP1.3□□□□□ -2.2
USP9X-206ENST00000467173 OPALINQ96PE5 141 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 BPIFA3Q9BQP9 254 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 CHCHD7Q9BUK0 85 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 ZYG11BQ9C0D3 744 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 CLSTN2Q9H4D0 955 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 CRLF2Q9HC73 371 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 CCNB1IP1Q9NPC3 277 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 PEF1Q9UBV8 284 aaKnown RBP1.3□□□□□ -2.2
USP9X-206ENST00000467173 TRMT112Q9UI30 125 aaKnown RBP1.3□□□□□ -2.2
USP9X-206ENST00000467173 R4GN34 69 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 ADGRA3Q8IWK6 1321 aa1.3□□□□□ -2.2
USP9X-206ENST00000467173 COL22A1Q8NFW1 1626 aaPredicted RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 COL5A3P25940 1745 aaPredicted RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 BAZ2AQ9UIF9 1905 aaKnown RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 IGHV1-69DA0A0B4J2H0 117 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 A0A1W2PRD5 423 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 SUPT3HB4E1H0 165 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 C4orf51C9J302 202 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 M0R3G1 203 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 KLHL2O95198 593 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 FSTL3O95633 263 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 OXTP01178 125 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 IGLV2-8P01709 118 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 HBE1P02100 147 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 ARG1P05089 322 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 GSTM3P21266 225 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 PSMB5P28074 263 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 CCT6AP40227 531 aaKnown RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 PEX19P40855 299 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 RPS5P46782 204 aaKnown RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 IDH2P48735 452 aaKnown RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 NDUFA8P51970 172 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 CRISP1P54107 249 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 CLDN8P56748 225 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 EIF3EP60228 445 aaKnown RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 RAB11AP62491 216 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 MEF2CQ06413 473 aaPredicted RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 DGCR6Q14129 220 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 ITIH4Q14624 930 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 RAB11BQ15907 218 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 KLHL40Q2TBA0 621 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 H3F3CQ6NXT2 135 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 CHST4Q8NCG5 386 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 PEX13Q92968 403 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 TMEM230Q96A57 120 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 C9orf72Q96LT7 481 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 PRRC1Q96M27 445 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 TMEM243Q9BU79 118 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 UCK2Q9BZX2 261 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 ACTR3CQ9C0K3 210 aaPredicted RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 IL22Q9GZX6 179 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 TDRD3Q9H7E2 651 aaKnown RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 FANCEQ9HB96 536 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 LYRM4Q9HD34 91 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 CLN6Q9NWW5 311 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 PDP1Q9P0J1 537 aaPredicted RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 CHTOPQ9Y3Y2 248 aaKnown RBP1.29□□□□□ -2.2
USP9X-206ENST00000467173 TTC41PQ6P2S7 1318 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 PLEKHG2Q9H7P9 1386 aa1.29□□□□□ -2.2
USP9X-206ENST00000467173 ZNF878C9JN71 531 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 H0YC42 278 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 FCN3O75636 299 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 FLOT1O75955 427 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 CCNB2O95067 398 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 LSM8O95777 96 aaKnown RBP1.28□□□□□ -2.2
USP9X-206ENST00000467173 UBCP0CG48 685 aaKnown RBP1.28□□□□□ -2.2
USP9X-206ENST00000467173 GFAPP14136 432 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 PRKACAP17612 351 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 RAB4AP20338 218 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 MSR1P21757 451 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 RBM34P42696 430 aaKnown RBP1.28□□□□□ -2.2
USP9X-206ENST00000467173 VSX2P58304 361 aaPredicted RBP1.28□□□□□ -2.2
USP9X-206ENST00000467173 DAOAP59103 153 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 SEMG2Q02383 582 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 DNAJC3Q13217 504 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 ZNF266Q14584 549 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 PIP5KL1Q5T9C9 394 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 MED27Q6P2C8 311 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 MBOAT2Q6ZWT7 520 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 APH1BQ8WW43 257 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 GHSRQ92847 366 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 BLZF1Q9H2G9 400 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 TMEM38AQ9H6F2 299 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 TMEM27Q9HBJ8 222 aa1.28□□□□□ -2.2
USP9X-206ENST00000467173 RPRD1BQ9NQG5 326 aaKnown RBP1.28□□□□□ -2.2
USP9X-206ENST00000467173 CHRAC1Q9NRG0 131 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms