RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 CLN8Q9UBY8 286 aa13.9□□□□□ -0.18
SDHB-203ENST00000466613 NUP50Q9UKX7 468 aa13.9□□□□□ -0.18
SDHB-203ENST00000466613 IGHV2-70DA0A0C4DH43 119 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 hCG_38984A0A1B0GV85 526 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 PHYHO14832 338 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 TIPRLO75663 272 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 PPIAL4GP0DN37 164 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 SLC2A5P22732 501 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 CFL1P23528 166 aaKnown RBP13.89□□□□□ -0.19
SDHB-203ENST00000466613 CD80P33681 288 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 RPS7P62081 194 aaKnown RBP13.89□□□□□ -0.19
SDHB-203ENST00000466613 HOXA4Q00056 320 aaPredicted RBP13.89□□□□□ -0.19
SDHB-203ENST00000466613 KCNJ8Q15842 424 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 KLF17Q5JT82 389 aaPredicted RBP13.89□□□□□ -0.19
SDHB-203ENST00000466613 TMEM236Q5W0B7 351 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 LYPD2Q6UXB3 125 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.89□□□□□ -0.19
SDHB-203ENST00000466613 BBS1Q8NFJ9 593 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 FAM216AQ8WUB2 273 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 RAB40AQ8WXH6 277 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 UTP4Q969X6 686 aaKnown RBP13.89□□□□□ -0.19
SDHB-203ENST00000466613 PGAM5Q96HS1 289 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 PAPOLBQ9NRJ5 636 aaKnown RBP13.89□□□□□ -0.19
SDHB-203ENST00000466613 C14orf119Q9NWQ9 140 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 C1orf123Q9NWV4 160 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 ZNF319Q9P2F9 582 aa13.89□□□□□ -0.19
SDHB-203ENST00000466613 TENM1Q9UKZ4 2725 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 A6NLC8 198 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 LGALS8O00214 317 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 GRPP07492 148 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 PSMB10P40306 273 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 NAA10P41227 235 aaPredicted RBP13.88□□□□□ -0.19
SDHB-203ENST00000466613 NPY4RP50391 375 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 CRISP1P54107 249 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 ACTG1P63261 375 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 TUSC1Q2TAM9 212 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 GFOD2Q3B7J2 385 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 WDR25Q64LD2 544 aaPredicted RBP13.88□□□□□ -0.19
SDHB-203ENST00000466613 SFRP4Q6FHJ7 346 aaPredicted RBP13.88□□□□□ -0.19
SDHB-203ENST00000466613 FAHD1Q6P587 224 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 ZNF841Q6ZN19 808 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 BOLLQ8N9W6 283 aaKnown RBP13.88□□□□□ -0.19
SDHB-203ENST00000466613 OR8S1Q8NH09 359 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 THEM6Q8WUY1 208 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 MMADHCQ9H3L0 296 aaPredicted RBP13.88□□□□□ -0.19
SDHB-203ENST00000466613 RGCCQ9H4X1 137 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 BRD7Q9NPI1 651 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 ESM1Q9NQ30 184 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 TRIM36Q9NQ86 728 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 ZNF69Q9UC07 566 aa13.88□□□□□ -0.19
SDHB-203ENST00000466613 TRAV38-1A0A0B4J264 116 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 OOEPA6NGQ2 149 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 C3orf80F5H4A9 247 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 HAX1O00165 279 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 GSK3AP49840 483 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 RASSF2P50749 326 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 DAPP51397 102 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 PSMA6P60900 246 aaKnown RBP13.87□□□□□ -0.19
SDHB-203ENST00000466613 APOFQ13790 326 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 OR8B8Q15620 311 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 SNAPC1Q16533 368 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 ZNF826PQ6ZT77 177 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 PARP8Q8N3A8 854 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 GCSAMQ8N6F7 178 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 ZDHHC22Q8N966 263 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 CSNK2A3Q8NEV1 391 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 NUDT16L1Q9BRJ7 211 aaKnown RBP13.87□□□□□ -0.19
SDHB-203ENST00000466613 TVP23BQ9NYZ1 205 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 CTSZQ9UBR2 303 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 KLHDC2Q9Y2U9 406 aa13.87□□□□□ -0.19
SDHB-203ENST00000466613 KIR2DS1A0A191URI9 304 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 hCG_1807616A0A1W2PRN6 198 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 SNCBQ16143 134 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 C12orf54Q6X4T0 127 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 RBMS3Q6XE24 437 aaKnown RBP13.86□□□□□ -0.19
SDHB-203ENST00000466613 DOK3Q7L591 496 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 WDR86Q86TI4 376 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 FTMTQ8N4E7 242 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 SIGLECL1Q8N7X8 197 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 OR5K1Q8NHB7 308 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 UPRTQ96BW1 309 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 NIPAL2Q9H841 368 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 ERVK-18Q9QC07 812 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 LAMP5Q9UJQ1 280 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 LRP12Q9Y561 859 aa13.86□□□□□ -0.19
SDHB-203ENST00000466613 TMEM89A2RUT3 159 aa13.85□□□□□ -0.19
SDHB-203ENST00000466613 TNFRSF13BO14836 293 aaPredicted RBP13.85□□□□□ -0.19
SDHB-203ENST00000466613 NDUFA2O43678 99 aa13.85□□□□□ -0.19
SDHB-203ENST00000466613 ATP5HO75947 161 aa13.85□□□□□ -0.19
SDHB-203ENST00000466613 LHBP01229 141 aa13.85□□□□□ -0.19
SDHB-203ENST00000466613 IGHV4-38-2P0DP08 117 aa13.85□□□□□ -0.19
SDHB-203ENST00000466613 EGR1P18146 543 aa13.85□□□□□ -0.19
SDHB-203ENST00000466613 ALOX5APP20292 161 aa13.85□□□□□ -0.19
SDHB-203ENST00000466613 GNALP38405 381 aa13.85□□□□□ -0.19
SDHB-203ENST00000466613 COMPP49747 757 aaPredicted RBP13.85□□□□□ -0.19
SDHB-203ENST00000466613 ESRRGP62508 458 aa13.85□□□□□ -0.19
SDHB-203ENST00000466613 UBA52P62987 128 aaKnown RBP13.85□□□□□ -0.19
SDHB-203ENST00000466613 PTGES3Q15185 160 aaKnown RBP13.85□□□□□ -0.19
SDHB-203ENST00000466613 ATP6AP1Q15904 470 aa13.85□□□□□ -0.19
SDHB-203ENST00000466613 LCN1P1Q5VSP4 162 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms