RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 SLC6A9P48067 706 aa16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 GRB2P62993 217 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 PPP1R1AQ13522 171 aa16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 TRA2AQ13595 282 aaKnown RBP eCLIP16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 MEF2DQ14814 521 aa16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 DOK3Q7L591 496 aa16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 C1QL2Q7Z5L3 287 aa16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 TMEM123Q8N131 208 aa16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 ZIC4Q8N9L1 334 aa16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 SSC4DQ8WTU2 575 aa16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 PGAM5Q96HS1 289 aa16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 IFT46Q9NQC8 304 aa16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 SLC2A8Q9NY64 477 aa16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 NOP16Q9Y3C1 178 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-210ENST00000464987 ZSCAN5BA6NJL1 495 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 RAD51DO75771 328 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 CER1O95813 267 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 ERCC1P07992 297 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 FOLR3P41439 243 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 RAB14P61106 215 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 Q0VFX4 171 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 C10orf128Q5T292 105 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 PGAP1Q75T13 922 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 CCDC28AQ8IWP9 274 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 ADAD2Q8NCV1 583 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 GPER1Q99527 375 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 PRRT1Q99946 306 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 FBLN5Q9UBX5 448 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 STK17BO94768 372 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 RRASP10301 218 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 CD34P28906 385 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 NTF4P34130 210 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 LSM6P62312 80 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 AANATQ16613 207 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 YRDCQ86U90 279 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 ESX1Q8N693 406 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 WBP1Q96G27 269 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 SEC22AQ96IW7 307 aa16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 MYOZ1Q9NP98 299 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-210ENST00000464987 RP2O75695 350 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 SCO1O75880 301 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 PDGFAP04085 211 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 ZBTB25P24278 435 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 DUSP3P51452 185 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 TCEAL6Q6IPX3 200 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 ST8SIA4Q92187 359 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 TCEAL3Q969E4 200 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 CXorf58Q96LI9 332 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 TMEM59Q9BXS4 323 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 RFPL4AA6NLU0 287 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 RFPL4AL1F8VTS6 287 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 DHHO43323 396 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 CRTAPO75718 401 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 IGLV3-1P01715 115 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 C4BPBP20851 252 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 OTX2P32243 289 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 LRRC37A5PQ49AS3 106 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 SLC25A42Q86VD7 318 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 GJC3Q8NFK1 279 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 OR5M8Q8NGP6 311 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 FBXO17Q96EF6 278 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 ARHGAP5-AS1Q96IT6 56 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 ZC3H10Q96K80 434 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 DMRTA2Q96SC8 542 aa16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 FOXD3Q9UJU5 478 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-210ENST00000464987 CDK2AP1O14519 115 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 EIF1BO60739 113 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 RFPL3SP0C7P2 107 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 FAHP16930 419 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 AVPR2P30518 371 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 GUCA1AP43080 201 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 UBE2V2Q15819 145 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 C1orf210Q8IVY1 113 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 BEST3Q8N1M1 668 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 OR10K1Q8NGX5 313 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 COQ8AQ8NI60 647 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 RAB3CQ96E17 227 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 MFFQ9GZY8 342 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 CBR3O75828 277 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 F10P00742 488 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 CTSSP25774 331 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 B3GALT5-AS1P59052 145 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 RAC1P63000 192 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 MICBQ29980 383 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 GSG1LQ6UXU4 331 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 FOXL2NBQ6ZUU3 175 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 OR2W3Q7Z3T1 314 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 PPP1R32Q7Z5V6 425 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 DTWD2Q8NBA8 298 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 KCNG3Q8TAE7 436 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 NARFLQ9H6Q4 476 aa16.41■□□□□ 0.22
TSPAN4-210ENST00000464987 C9orf170A2RU37 121 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 HIST1H1DP16402 221 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 AKR1C4P17516 323 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 GSK3AP49840 483 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 ZNF133P52736 654 aaPredicted RBP16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 PRSS12P56730 875 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 KISS1Q15726 138 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 SNAI3Q3KNW1 292 aa16.4■□□□□ 0.22
TSPAN4-210ENST00000464987 CCDC157Q569K6 752 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms