RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 CFHR2P36980 270 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 CX3CR1P49238 355 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 FAM3AP98173 230 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 EIF2B1Q14232 305 aaKnown RBP11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 SNCBQ16143 134 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 TEX36Q5VZQ5 186 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 SHFQ7M4L6 423 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 SLC16A9Q7RTY1 509 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 PRSS45Q7RTY3 260 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 DPY19L4Q7Z388 723 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 GCSAMQ8N6F7 178 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 BOLLQ8N9W6 283 aaKnown RBP11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 PNLDC1Q8NA58 520 aaKnown RBP11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 OR10G2Q8NGC3 310 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 OR52H1Q8NGJ2 320 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 OR8S1Q8NH09 359 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 TEX47Q8TBZ9 253 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 SGK3Q96BR1 496 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 ASB9Q96DX5 294 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 CCT8L2Q96SF2 557 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 INTS14Q96SY0 518 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 FEVQ99581 238 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 ABHD6Q9BV23 337 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 RGCCQ9H4X1 137 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 UNKLQ9H9P5 680 aaKnown RBP11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 N6AMT1Q9Y5N5 214 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 SOX21Q9Y651 276 aaPredicted RBP11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 A6NLC8 198 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 SRRM5B3KS81 715 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 TBX1O43435 398 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 TIPRLO75663 272 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 GLCEO94923 617 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 ANXA2P07355 339 aaKnown RBP11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 MMP9P14780 707 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 MUC1P15941 1255 aaPredicted RBP11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 HSD11B1P28845 292 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 GSTT1P30711 240 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 OPRL1P41146 370 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 TIGD6Q17RP2 521 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 DEFB112Q30KQ8 113 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 BRD3OSQ6XYD6 125 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 ZNF826PQ6ZT77 177 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 SPATC1Q76KD6 591 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 FAM90A1Q86YD7 464 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 C11orf53Q8IXP5 236 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 TMEM86BQ8N661 226 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 OR6N2Q8NGY6 317 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 GIPC3Q8TF64 312 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 REEP6Q96HR9 211 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 FAM71F1Q96KD3 344 aaPredicted RBP11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 NIPSNAP1Q9BPW8 284 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 SLITRK2Q9H156 845 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 OR10A2Q9H208 303 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 C1orf21Q9H246 121 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 MMP24Q9Y5R2 645 aa11.91□□□□□ -0.5
SNRNP40-203ENST00000463988 A0A1B0GUS0 222 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 hCG_38984A0A1B0GV85 526 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 hCG_1807616A0A1W2PRN6 198 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 HOXA3O43365 443 aaPredicted RBP11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 TOX4O94842 621 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 GYPAP02724 150 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 T-ENOLP0DO92 83 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 PAICSP22234 425 aaKnown RBP11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 GSK3AP49840 483 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 PDCD1Q15116 288 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 MICBQ29980 383 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 METTL11BQ5VVY1 283 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 Q6YL49 198 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 ERI1Q8IV48 349 aaKnown RBP11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 TIGD4Q8IY51 512 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 FTMTQ8N4E7 242 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 ZNF454Q8N9F8 522 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 CSNK2A3Q8NEV1 391 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 LRGUKQ96M69 825 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 DMRTB1Q96MA1 342 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 WDFY2Q96P53 400 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 TBX15Q96SF7 602 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 PCGF1Q9BSM1 259 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 CHID1Q9BWS9 393 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 TLNRD1Q9H1K6 362 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 MED20Q9H944 212 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 SMURF1Q9HCE7 757 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 TRRAPQ9Y4A5 3859 aa11.9□□□□□ -0.5
SNRNP40-203ENST00000463988 CENPVL3A0A0U1RRI6 287 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 MDFIC2A0A1B0GVS7 189 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 FAM183AA6NL82 134 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 H3BN98 237 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 DVL1O14640 695 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 ACOT8O14734 319 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 FAM107AO95990 144 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 CST1P01037 141 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 HMGN1P05114 100 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 SFTPBP07988 381 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 NAA10P41227 235 aaPredicted RBP11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 ZNF121P58317 390 aaPredicted RBP11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 IL5RAQ01344 420 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 KLHL12Q53G59 568 aa11.89□□□□□ -0.51
SNRNP40-203ENST00000463988 FAM57BQ71RH2 274 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms