RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 YIPF5Q969M3 257 aa16.07■□□□□ 0.16
LMNB1-204ENST00000463908 DIRC2Q96SL1 478 aa16.07■□□□□ 0.16
LMNB1-204ENST00000463908 PPP1R3EQ9H7J1 279 aa16.07■□□□□ 0.16
LMNB1-204ENST00000463908 GPR84Q9NQS5 396 aa16.07■□□□□ 0.16
LMNB1-204ENST00000463908 CNOT2Q9NZN8 540 aaKnown RBP16.07■□□□□ 0.16
LMNB1-204ENST00000463908 GTF2A1LQ9UNN4 478 aa16.07■□□□□ 0.16
LMNB1-204ENST00000463908 IRGMA1A4Y4 181 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 TRIM64A6NGJ6 449 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 TRIM64BA6NI03 449 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 E9PI62 339 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 CA6P23280 308 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 C21orf33P30042 268 aaPredicted RBP16.06■□□□□ 0.16
LMNB1-204ENST00000463908 RBMXP38159 391 aaKnown RBP16.06■□□□□ 0.16
LMNB1-204ENST00000463908 KIR3DL2P43630 455 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 CSNK2BP67870 215 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 HNRNPA0Q13151 305 aaKnown RBP16.06■□□□□ 0.16
LMNB1-204ENST00000463908 ZMAT1Q5H9K5 638 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 WDR38Q5JTN6 314 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 BCL2L15Q5TBC7 163 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 TGIF2LYQ8IUE0 185 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 PLPP7Q8NBV4 271 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 OR10AD1Q8NGE0 317 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 OR2G2Q8NGZ5 317 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 C10orf105Q8TEF2 133 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 ELMOD3Q96FG2 381 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 CNBD2Q96M20 576 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 ZNF184Q99676 751 aaPredicted RBP16.06■□□□□ 0.16
LMNB1-204ENST00000463908 MOB1AQ9H8S9 216 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 DECR2Q9NUI1 292 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 MRPL15Q9P015 296 aaKnown RBP16.06■□□□□ 0.16
LMNB1-204ENST00000463908 FRRS1LQ9P0K9 344 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 ZNF391Q9UJN7 358 aa16.06■□□□□ 0.16
LMNB1-204ENST00000463908 ZNF469Q96JG9 3925 aaPredicted RBP16.06■□□□□ 0.16
LMNB1-204ENST00000463908 IGHV4-30-2A0A087WSY4 118 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 EFCAB10A6NFE3 127 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 SLC1A7O00341 560 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 P2RY10O00398 339 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 CRYBB2P43320 205 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 ACTA2P62736 377 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 ACTG2P63267 376 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 TNFAIP6P98066 277 aaPredicted RBP16.05■□□□□ 0.16
LMNB1-204ENST00000463908 SNCBQ16143 134 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 OR2G6Q5TZ20 316 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 Q6ZSR3 168 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 AHSA2Q719I0 299 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 KRT74Q7RTS7 529 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 FAM220AQ7Z4H9 259 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 SGCDQ92629 289 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 RDH5Q92781 318 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 PAK1IP1Q9NWT1 392 aaPredicted RBP16.05■□□□□ 0.16
LMNB1-204ENST00000463908 UBAP1Q9NZ09 502 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 RHBDD3Q9Y3P4 386 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 CACNG2Q9Y698 323 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 VPS13CQ709C8 3753 aa16.05■□□□□ 0.16
LMNB1-204ENST00000463908 NAV3Q8IVL0 2385 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 PTGES3LE9PB15 166 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 F5H5P2 479 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 DENRO43583 198 aaKnown RBP16.04■□□□□ 0.16
LMNB1-204ENST00000463908 CDC14BO60729 498 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 RP2O75695 350 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 DSCR9P59020 149 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 MRPS11P82912 194 aaKnown RBP16.04■□□□□ 0.16
LMNB1-204ENST00000463908 MAB21L1Q13394 359 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 ODF4Q2M2E3 257 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 RDH10Q8IZV5 341 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 CIARTQ8N365 385 aaPredicted RBP16.04■□□□□ 0.16
LMNB1-204ENST00000463908 ZNF485Q8NCK3 441 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 ZNF540Q8NDQ6 660 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 ITLN1Q8WWA0 313 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 FAM168AQ92567 244 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 DVL3Q92997 716 aaPredicted RBP16.04■□□□□ 0.16
LMNB1-204ENST00000463908 MRPL48Q96GC5 212 aaKnown RBP16.04■□□□□ 0.16
LMNB1-204ENST00000463908 FAM71F1Q96KD3 344 aaPredicted RBP16.04■□□□□ 0.16
LMNB1-204ENST00000463908 SAP30LQ9HAJ7 183 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 IL19Q9UHD0 177 aa16.04■□□□□ 0.16
LMNB1-204ENST00000463908 CAB39Q9Y376 341 aaPredicted RBP16.04■□□□□ 0.16
LMNB1-204ENST00000463908 EXOSC1Q9Y3B2 195 aaKnown RBP16.04■□□□□ 0.16
LMNB1-204ENST00000463908 MAP1AP78559 2803 aaPredicted RBP16.03■□□□□ 0.16
LMNB1-204ENST00000463908 LOC390937A0A1W2PQ73 354 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 VWC2LB2RUY7 222 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 TPD52L2O43399 206 aaKnown RBP16.03■□□□□ 0.16
LMNB1-204ENST00000463908 CCL1P22362 96 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 PDLIM4P50479 330 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 CCR9P51686 369 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 GTF2A1P52655 376 aaPredicted RBP16.03■□□□□ 0.16
LMNB1-204ENST00000463908 RIN1Q13671 783 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 CLEC2AQ6UVW9 174 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 CSNK2A3Q8NEV1 391 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 OR14K1Q8NGZ2 314 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 MEGF10Q96KG7 1140 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 OR2V2Q96R30 315 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 MYCBPQ99417 103 aaPredicted RBP16.03■□□□□ 0.16
LMNB1-204ENST00000463908 EGLN1Q9GZT9 426 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 SLC22A4Q9H015 551 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 DUSP21Q9H596 190 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 MYOZ1Q9NP98 299 aaPredicted RBP16.03■□□□□ 0.16
LMNB1-204ENST00000463908 TREM2Q9NZC2 230 aa16.03■□□□□ 0.16
LMNB1-204ENST00000463908 IGHV1-69-2A0A0G2JMI3 117 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 IGHV3-64DA0A0J9YX35 117 aa16.02■□□□□ 0.16
LMNB1-204ENST00000463908 OR4C45A6NMZ5 311 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms