RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SGMS2Q8NHU3 365 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 RNF133Q8WVZ7 376 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 TECTBQ96PL2 329 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 THTPAQ9BU02 230 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 OR51V1Q9H2C8 321 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 SP140LQ9H930 580 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 C14orf119Q9NWQ9 140 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 CTSZQ9UBR2 303 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 PCDHGB1Q9Y5G3 927 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 TRAV38-1A0A0B4J264 116 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 A6NLC8 198 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 ANKRD30BLA7E2S9 258 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 ADAM20O43506 726 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 NDUFA2O43678 99 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 GLCEO94923 617 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 POU1F1P28069 291 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 TIGD6Q17RP2 521 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 CD276Q5ZPR3 534 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 FAM57BQ71RH2 274 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 SHFQ7M4L6 423 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 SLC16A9Q7RTY1 509 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 TMEM179BQ7Z7N9 219 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 SLC25A28Q96A46 364 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 REEP6Q96HR9 211 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 ZNF747Q9BV97 191 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 RASSF4Q9H2L5 321 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 MARCH7Q9H992 704 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 DNAJC27Q9NZQ0 273 aa15.67■□□□□ 0.1
SF3A1-205ENST00000463818 OOEPA6NGQ2 149 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 CLDN34H7C241 214 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 GNGT2O14610 69 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 GYG2O15488 501 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 ENSAO43768 121 aaKnown RBP15.66■□□□□ 0.1
SF3A1-205ENST00000463818 LHBP01229 141 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 APOC1P02654 83 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 GYPAP02724 150 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 RNASE1P07998 156 aaKnown RBP15.66■□□□□ 0.1
SF3A1-205ENST00000463818 POU4F2Q12837 409 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 GINS1Q14691 196 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 BRD3OSQ6XYD6 125 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 PRSS45Q7RTY3 260 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 C11orf53Q8IXP5 236 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 TIGD4Q8IY51 512 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 GCSAMQ8N6F7 178 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 OR8S1Q8NH09 359 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 CANT1Q8WVQ1 401 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 AMELYQ99218 206 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 BRD7Q9NPI1 651 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 TRIM36Q9NQ86 728 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 PDP1Q9P0J1 537 aaPredicted RBP15.66■□□□□ 0.1
SF3A1-205ENST00000463818 ZNF319Q9P2F9 582 aa15.66■□□□□ 0.1
SF3A1-205ENST00000463818 hCG_1807616A0A1W2PRN6 198 aa15.65■□□□□ 0.1
SF3A1-205ENST00000463818 ARRDC5A6NEK1 342 aa15.65■□□□□ 0.1
SF3A1-205ENST00000463818 AQP12BA6NM10 295 aa15.65■□□□□ 0.1
SF3A1-205ENST00000463818 SPRY1O43609 319 aaPredicted RBP15.65■□□□□ 0.1
SF3A1-205ENST00000463818 ATP5HO75947 161 aa15.65■□□□□ 0.1
SF3A1-205ENST00000463818 OPRL1P41146 370 aa15.65■□□□□ 0.1
SF3A1-205ENST00000463818 GSK3AP49840 483 aa15.65■□□□□ 0.1
SF3A1-205ENST00000463818 ZNF121P58317 390 aaPredicted RBP15.65■□□□□ 0.1
SF3A1-205ENST00000463818 RHOUQ7L0Q8 258 aa15.65■□□□□ 0.1
SF3A1-205ENST00000463818 AQP12AQ8IXF9 295 aa15.65■□□□□ 0.1
SF3A1-205ENST00000463818 OR52H1Q8NGJ2 320 aa15.65■□□□□ 0.1
SF3A1-205ENST00000463818 OR10A2Q9H208 303 aa15.65■□□□□ 0.1
SF3A1-205ENST00000463818 IGHV3OR15-7A0A075B7D8 119 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 MDFIC2A0A1B0GVS7 189 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 ZNF879B4DU55 563 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 PRR23D1E9PI22 279 aaPredicted RBP15.64■□□□□ 0.09
SF3A1-205ENST00000463818 DNAJC8O75937 253 aaPredicted RBP15.64■□□□□ 0.09
SF3A1-205ENST00000463818 LIPFP07098 398 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 H2BFMP0C1H6 154 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 PRR23D2P0DMB1 279 aaPredicted RBP15.64■□□□□ 0.09
SF3A1-205ENST00000463818 HOXB6P17509 224 aaKnown RBP15.64■□□□□ 0.09
SF3A1-205ENST00000463818 PAICSP22234 425 aaKnown RBP15.64■□□□□ 0.09
SF3A1-205ENST00000463818 CFHR2P36980 270 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 DEFB112Q30KQ8 113 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 KLHL12Q53G59 568 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 GPR157Q5UAW9 335 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 PLBD1Q6P4A8 553 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 WDR86Q86TI4 376 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 FAM90A1Q86YD7 464 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.64■□□□□ 0.09
SF3A1-205ENST00000463818 OR1M1Q8NGA1 313 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 THEM6Q8WUY1 208 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 ZDHHC16Q969W1 377 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 PGAM5Q96HS1 289 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 PCGF1Q9BSM1 259 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 PPP1R3EQ9H7J1 279 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 RNPEPL1Q9HAU8 725 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 SMURF1Q9HCE7 757 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 RHBDD3Q9Y3P4 386 aa15.64■□□□□ 0.09
SF3A1-205ENST00000463818 hCG_38984A0A1B0GV85 526 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 P2RY10O00398 339 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 GSC2O15499 205 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 HMGN1P05114 100 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 SFTPBP07988 381 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 PRKACGP22612 351 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 CFL1P23528 166 aaKnown RBP15.63■□□□□ 0.09
SF3A1-205ENST00000463818 RASSF2P50749 326 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 BPIFB3P59826 476 aa15.63■□□□□ 0.09
SF3A1-205ENST00000463818 GFOD2Q3B7J2 385 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms