RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 FAM216BQ8N7L0 139 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 OR2T12Q8NG77 320 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 C8orf46Q8TAG6 207 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 DYDC1Q8WWB3 177 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 C12orf43Q96C57 262 aaKnown RBP11.81□□□□□ -0.52
SMC1A-204ENST00000463684 TMEM120AQ9BXJ8 343 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 NSRP1Q9H0G5 558 aaKnown RBP11.81□□□□□ -0.52
SMC1A-204ENST00000463684 METTL8Q9H825 291 aaKnown RBP11.81□□□□□ -0.52
SMC1A-204ENST00000463684 CYB5R1Q9UHQ9 305 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 ANKRD30BLA7E2S9 258 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 FAM220BPB1ANY3 271 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 M0R1W7 72 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 ACOT8O14734 319 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 CD28P10747 220 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 POU1F1P28069 291 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 TGM4P49221 684 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 LRRC75BQ2VPJ9 315 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 GLYATL3Q5SZD4 288 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 C11orf87Q6NUJ2 197 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 FKBP9P1Q75LS8 142 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 OR9Q1Q8NGQ5 310 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 RSRC1Q96IZ7 334 aaKnown RBP11.8□□□□□ -0.52
SMC1A-204ENST00000463684 ERMAPQ96PL5 475 aaPredicted RBP11.8□□□□□ -0.52
SMC1A-204ENST00000463684 NKX3-1Q99801 234 aaPredicted RBP11.8□□□□□ -0.52
SMC1A-204ENST00000463684 MEGF9Q9H1U4 602 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 ANKRD19PQ9H560 264 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 OPA3Q9H6K4 179 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 PNRC2Q9NPJ4 139 aaKnown RBP11.8□□□□□ -0.52
SMC1A-204ENST00000463684 ADA2Q9NZK5 511 aa11.8□□□□□ -0.52
SMC1A-204ENST00000463684 A0A1W2PQ09 198 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 FXYD1O00168 92 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 ZNF682O95780 498 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 ZNF823P16415 610 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 CD33P20138 364 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 DDOSTP39656 456 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 GSK3BP49841 420 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 AANATQ16613 207 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 IFI44LQ53G44 452 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 ZBTB37Q5TC79 503 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 METTL21CQ5VZV1 264 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 DRAM2Q6UX65 266 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 LIAT1Q6ZQX7 453 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 C11orf53Q8IXP5 236 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 OR5T2Q8NGG2 359 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 OR56B2PQ8NGI1 322 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 RORBQ92753 470 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 NMNAT3Q96T66 252 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 KRCC1Q9NPI7 259 aaPredicted RBP11.79□□□□□ -0.52
SMC1A-204ENST00000463684 RPRD1BQ9NQG5 326 aaKnown RBP11.79□□□□□ -0.52
SMC1A-204ENST00000463684 GID8Q9NWU2 228 aa11.79□□□□□ -0.52
SMC1A-204ENST00000463684 UNC119BA6NIH7 251 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 NKX6-3A6NJ46 265 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 H0YAE9 185 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 MRASO14807 208 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 PEX14O75381 377 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 TIPRLO75663 272 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 FAHP16930 419 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 COQ5Q5HYK3 327 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 ATPAF1Q5TC12 328 aaPredicted RBP11.78□□□□□ -0.52
SMC1A-204ENST00000463684 CRIP3Q6Q6R5 217 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 SMARCD3Q6STE5 483 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 WDR82Q6UXN9 313 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 OR1M1Q8NGA1 313 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 OR5D13Q8NGL4 314 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 OR4C15Q8NGM1 316 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 C17orf50Q8WW18 174 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 SEH1LQ96EE3 360 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 MED30Q96HR3 178 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 MAP6Q96JE9 813 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 WWC2-AS2Q96NR7 200 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 DNTTIP1Q9H147 329 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 KCNG2Q9UJ96 466 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 N6AMT1Q9Y5N5 214 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 CAPN7Q9Y6W3 813 aa11.78□□□□□ -0.52
SMC1A-204ENST00000463684 BBIP1A8MTZ0 92 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 XRCC2O43543 280 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 IGLL1P15814 213 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 NDUFB7P17568 137 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 NOS3P29474 1203 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 OMPP47874 163 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 SLC7A2P52569 658 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 FXYD6P3P58550 94 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 TAF13Q15543 124 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 FGD3Q5JSP0 725 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 ZBTB46Q86UZ6 589 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 OR4K13Q8NH42 304 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 DUS3LQ96G46 650 aaKnown RBP11.77□□□□□ -0.53
SMC1A-204ENST00000463684 CITED2Q99967 270 aaPredicted RBP11.77□□□□□ -0.53
SMC1A-204ENST00000463684 HAO2Q9NYQ3 351 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 SLC25A10Q9UBX3 287 aaPredicted RBP11.77□□□□□ -0.53
SMC1A-204ENST00000463684 ZNF391Q9UJN7 358 aa11.77□□□□□ -0.53
SMC1A-204ENST00000463684 FAM32AQ9Y421 112 aaKnown RBP11.77□□□□□ -0.53
SMC1A-204ENST00000463684 A0A0G2JND7 137 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 A0A1W2PRQ8 180 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.76□□□□□ -0.53
SMC1A-204ENST00000463684 K7EIL1 84 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 CDIPTO14735 213 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 GSTA4O15217 222 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 ANGPTL7O43827 346 aa11.76□□□□□ -0.53
SMC1A-204ENST00000463684 H1F0P07305 194 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms