RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 CSNK2A3Q8NEV1 391 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 OR8S1Q8NH09 359 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 PYDC1Q8WXC3 89 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 ASB17Q8WXJ9 295 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 DVL3Q92997 716 aaPredicted RBP13.62□□□□□ -0.23
COL1A1-202ENST00000463440 CNN2Q99439 309 aaKnown RBP13.62□□□□□ -0.23
COL1A1-202ENST00000463440 CIB1Q99828 191 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 OSBPL10Q9BXB5 764 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 TMPRSS13Q9BYE2 586 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 C7orf69Q9H7B7 122 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 RNF7Q9UBF6 113 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 LRCH1Q9Y2L9 728 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 LRP12Q9Y561 859 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 WNK2Q9Y3S1 2297 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 FBN1P35555 2871 aaKnown RBP13.61□□□□□ -0.23
COL1A1-202ENST00000463440 SAC3D1A6NKF1 404 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 SLC22A31A6NKX4 558 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 A8MXK9 166 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 M0R129 80 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 EBAG9O00559 213 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 PTBP3O95758 552 aaKnown RBP13.61□□□□□ -0.23
COL1A1-202ENST00000463440 WNT2P09544 360 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 GNALP38405 381 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 GSK3AP49840 483 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 EFNB1P98172 346 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 KPNB1Q14974 876 aaKnown RBP13.61□□□□□ -0.23
COL1A1-202ENST00000463440 ZNF404Q494X3 552 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 ZFP1Q6P2D0 407 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 NLRC3Q7RTR2 1065 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 GID4Q8IVV7 300 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 C10orf67Q8IYJ2 551 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 IL4I1Q96RQ9 567 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 RBM4BQ9BQ04 359 aaKnown RBP13.61□□□□□ -0.23
COL1A1-202ENST00000463440 TMEM246Q9BRR3 403 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 MROQ9BYG7 248 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 ZNF319Q9P2F9 582 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 OR5V1Q9UGF6 321 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 ZNF391Q9UJN7 358 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 POLR3KQ9Y2Y1 108 aaPredicted RBP13.61□□□□□ -0.23
COL1A1-202ENST00000463440 COL6A5A8TX70 2615 aa13.61□□□□□ -0.23
COL1A1-202ENST00000463440 MXRA5Q9NR99 2828 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 LOC105371242A0A075B767 164 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 ACOD1A6NK06 481 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 A6NLC8 198 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 TCF21O43680 179 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 ZNF254O75437 659 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 AVPP01185 164 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 GRPP07492 148 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 SEC61A1P61619 476 aaKnown RBP13.6□□□□□ -0.23
COL1A1-202ENST00000463440 OR8B8Q15620 311 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 FAM201AQ5SY85 155 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 AADACL4Q5VUY2 407 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 C1QL2Q7Z5L3 287 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 BCDIN3DQ7Z5W3 292 aaKnown RBP13.6□□□□□ -0.23
COL1A1-202ENST00000463440 OR8B3Q8NGG8 313 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 SPATA3Q8NHX4 192 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 NEIL1Q96FI4 390 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-202ENST00000463440 OR8B2Q96RD0 313 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 MNTQ99583 582 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 PAPOLGQ9BWT3 736 aaKnown RBP13.6□□□□□ -0.23
COL1A1-202ENST00000463440 SSBP3Q9BWW4 388 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-202ENST00000463440 GABARAPL3Q9BY60 117 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 RIBC2Q9H4K1 309 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 OCEL1Q9H607 264 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 C1orf123Q9NWV4 160 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 ARHGAP32A7KAX9 2087 aa13.6□□□□□ -0.23
COL1A1-202ENST00000463440 PHYHO14832 338 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 DCTDP32321 178 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 GNB2P62879 340 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 ROM1Q03395 351 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 KCNJ8Q15842 424 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 ZNF829Q3KNS6 432 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-202ENST00000463440 DCDC5Q6ZRR9 648 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 C1orf229Q6ZS94 237 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-202ENST00000463440 ZNF679Q8IYX0 411 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 BOLLQ8N9W6 283 aaKnown RBP13.59□□□□□ -0.23
COL1A1-202ENST00000463440 DEFB108BQ8NET1 73 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 OR8B12Q8NGG6 310 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 NANPQ8TBE9 248 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 OR8B4Q96RC9 309 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 PKP2Q99959 881 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 ABCB9Q9NP78 766 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 TRIM36Q9NQ86 728 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 HAO2Q9NYQ3 351 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 IKZF2Q9UKS7 526 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 RHBDD3Q9Y3P4 386 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 ORC6Q9Y5N6 252 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 MPC1Q9Y5U8 109 aa13.59□□□□□ -0.23
COL1A1-202ENST00000463440 SVEP1Q4LDE5 3571 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 TMEM269A0A1B0GVZ9 245 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 hCG_1807616A0A1W2PRN6 198 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 ANXA2P2A6NMY6 339 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 TRAPPC2LH3BP13 241 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 LGALS8O00214 317 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 PSMD9O00233 223 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 ZNF12P17014 697 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 POLR2IP36954 125 aaKnown RBP13.58□□□□□ -0.24
COL1A1-202ENST00000463440 RIDAP52758 137 aaKnown RBP13.58□□□□□ -0.24
COL1A1-202ENST00000463440 IL5RAQ01344 420 aa13.58□□□□□ -0.24
COL1A1-202ENST00000463440 SLC35F2Q8IXU6 374 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms