RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 PATZ1Q9HBE1 687 aaKnown RBP7.56□□□□□ -1.2
DDX39B-216ENST00000462421 NEK6Q9HC98 313 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 PNRC2Q9NPJ4 139 aaKnown RBP7.56□□□□□ -1.2
DDX39B-216ENST00000462421 C1orf123Q9NWV4 160 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 MPC1Q9Y5U8 109 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 AUP1Q9Y679 476 aa7.56□□□□□ -1.2
DDX39B-216ENST00000462421 SETD2Q9BYW2 2564 aaPredicted RBP7.56□□□□□ -1.2
DDX39B-216ENST00000462421 TMEM210A6NLX4 147 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 LOC110117498-PIK3R3F6TDL0 507 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 ATP6V1B1P15313 513 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 EPHA1P21709 976 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 OPRL1P41146 370 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 GATA4P43694 442 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 PITPNBP48739 271 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 LMO4P61968 165 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 ACTG1P63261 375 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 BCL2L15Q5TBC7 163 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 TMEM236Q5W0B7 351 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 FAHD1Q6P587 224 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 LYPD4Q6UWN0 246 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 Q6ZR03 302 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 MEPCEQ7L2J0 689 aaKnown RBP7.55□□□□□ -1.2
DDX39B-216ENST00000462421 SLC36A1Q7Z2H8 476 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 TMEM179BQ7Z7N9 219 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 SLC35F2Q8IXU6 374 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 TCEANCQ8N8B7 351 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 YIPF7Q8N8F6 280 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 PNLDC1Q8NA58 520 aaKnown RBP7.55□□□□□ -1.2
DDX39B-216ENST00000462421 DEFB108BQ8NET1 73 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 SEMA6DQ8NFY4 1073 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 LRTOMTQ8WZ04 291 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 IL4I1Q96RQ9 567 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 C9orf16Q9BUW7 83 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 REPIN1Q9BWE0 567 aaKnown RBP7.55□□□□□ -1.2
DDX39B-216ENST00000462421 MS4A7Q9GZW8 240 aaPredicted RBP7.55□□□□□ -1.2
DDX39B-216ENST00000462421 GABARAPL1Q9H0R8 117 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 NTN4Q9HB63 628 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 WARS2Q9UGM6 360 aaKnown RBP7.55□□□□□ -1.2
DDX39B-216ENST00000462421 ENPP5Q9UJA9 477 aa7.55□□□□□ -1.2
DDX39B-216ENST00000462421 PPIAL4CA0A0B4J2A2 164 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF816-ZNF321PA0A0X1KG74 233 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 A0A1B0GVI7 797 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 OOEPA6NGQ2 149 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 CEACAM18A8MTB9 384 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 KIAA1324LA8MWY0 1029 aaPredicted RBP7.54□□□□□ -1.2
DDX39B-216ENST00000462421 H0YL77 283 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 LGALS8O00214 317 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 ADAM20O43506 726 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 ENSAO43768 121 aaKnown RBP7.54□□□□□ -1.2
DDX39B-216ENST00000462421 MPZL2O60487 215 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 FAM20BO75063 409 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 BAG2O95816 211 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 SERPINA3P01011 423 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF12P17014 697 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 OTX1P32242 354 aaPredicted RBP7.54□□□□□ -1.2
DDX39B-216ENST00000462421 MTNR1AP48039 350 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 GSK3AP49840 483 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 DAPP51397 102 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 ACTC1P68032 377 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 ACTA1P68133 377 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 RIPPLY1Q0D2K3 151 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 TMED1Q13445 227 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 ZMYND11Q15326 602 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 KRTAP27-1Q3LI81 207 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 PRAMEF6Q5VXH4 476 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 C1QL2Q7Z5L3 287 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 NAA40Q86UY6 237 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 PRIMA1Q86XR5 153 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF679Q8IYX0 411 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 CMTM4Q8IZR5 234 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF555Q8NEP9 628 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 OR10H4Q8NGA5 316 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 OR51G2Q8NGK0 314 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 OR8J1Q8NGP2 316 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 Q8TCH9 128 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 PYDC1Q8WXC3 89 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 PIGCQ92535 297 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 UTP4Q969X6 686 aaKnown RBP7.54□□□□□ -1.2
DDX39B-216ENST00000462421 EME1Q96AY2 570 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 FAM71F1Q96KD3 344 aaPredicted RBP7.54□□□□□ -1.2
DDX39B-216ENST00000462421 Q96MT0 163 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 DDOQ99489 341 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 TEAD3Q99594 435 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 CIB1Q99828 191 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 SOX7Q9BT81 388 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 VCXQ9H320 206 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 OAZ3Q9UMX2 235 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 SLC7A11Q9UPY5 501 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 LRP12Q9Y561 859 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 PCDHGB1Q9Y5G3 927 aa7.54□□□□□ -1.2
DDX39B-216ENST00000462421 ABCA2Q9BZC7 2435 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 LOC105371242A0A075B767 164 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 C3orf80F5H4A9 247 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 WNT9BO14905 357 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 MLNRO43193 412 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 NDUFB3O43676 98 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF205O95201 554 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 FSTL3O95633 263 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 ECDO95905 644 aaPredicted RBP7.53□□□□□ -1.2
DDX39B-216ENST00000462421 CYB5AP00167 134 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms