RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 OCEL1Q9H607 264 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 FN3KRPQ9HA64 309 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 CUBNO60494 3623 aa12.94□□□□□ -0.34
VARS-219ENST00000461328 DNHD1Q96M86 4753 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 hCG_38984A0A1B0GV85 526 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 A0A1B0GWJ7 208 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 J3QLI3 93 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 POLR2IP36954 125 aaKnown RBP12.93□□□□□ -0.34
VARS-219ENST00000461328 GATA4P43694 442 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 CDC42P60953 191 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 FAM3AP98173 230 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 MAB21L1Q13394 359 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 PRSS45Q7RTY3 260 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 COMMD2Q86X83 199 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 KLBQ86Z14 1044 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 SLC35F2Q8IXU6 374 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 FTMTQ8N4E7 242 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 SPERTQ8NA61 448 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 FAM81AQ8TBF8 368 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 ERGIC1Q969X5 290 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 SGK3Q96BR1 496 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 C19orf24Q9BVV8 132 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 IMPAD1Q9NX62 359 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 GTF2A1LQ9UNN4 478 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 DYSFO75923 2080 aa12.93□□□□□ -0.34
VARS-219ENST00000461328 LOC105371242A0A075B767 164 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 hCG_1807616A0A1W2PRN6 198 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 ZNF670-ZNF695F2Z2N8 137 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 PHYHO14832 338 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 FAM20BO75063 409 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 FOXH1O75593 365 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 GRPP07492 148 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 RPS2P15880 293 aaKnown RBP12.92□□□□□ -0.34
VARS-219ENST00000461328 GATA3P23771 443 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 GSK3AP49840 483 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 RIDAP52758 137 aaKnown RBP12.92□□□□□ -0.34
VARS-219ENST00000461328 SNCBQ16143 134 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 ZNF181Q2M3W8 571 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 ZNF829Q3KNS6 432 aaPredicted RBP12.92□□□□□ -0.34
VARS-219ENST00000461328 ESCO2Q56NI9 601 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 AADACL4Q5VUY2 407 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 LRRC28Q86X40 367 aaPredicted RBP12.92□□□□□ -0.34
VARS-219ENST00000461328 BOLLQ8N9W6 283 aaKnown RBP12.92□□□□□ -0.34
VARS-219ENST00000461328 CSNK2A3Q8NEV1 391 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 OR8B12Q8NGG6 310 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 OR51G2Q8NGK0 314 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 TMPRSS13Q9BYE2 586 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 PATZ1Q9HBE1 687 aaKnown RBP12.92□□□□□ -0.34
VARS-219ENST00000461328 C14orf119Q9NWQ9 140 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 ZNF319Q9P2F9 582 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 COPS3Q9UNS2 423 aa12.92□□□□□ -0.34
VARS-219ENST00000461328 PPIAL4EA0A075B759 164 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 TMEM269A0A1B0GVZ9 245 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 CEACAM18A8MTB9 384 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 PPIAL4DF5H284 164 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 AVPP01185 164 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 ALPLP05186 524 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 PPIAL4FP0DN26 164 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 ATP6V1E1P36543 226 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 PMELP40967 661 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 ALDH3A2P51648 485 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 CXCR4P61073 352 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 MPPED2Q15777 294 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 ZIK1Q3SY52 487 aaPredicted RBP12.91□□□□□ -0.34
VARS-219ENST00000461328 FAM201AQ5SY85 155 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 DEGS2Q6QHC5 323 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 ZNF322Q6U7Q0 402 aaPredicted RBP12.91□□□□□ -0.34
VARS-219ENST00000461328 C1orf229Q6ZS94 237 aaPredicted RBP12.91□□□□□ -0.34
VARS-219ENST00000461328 ZNF679Q8IYX0 411 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 CBR4Q8N4T8 237 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 OR8J1Q8NGP2 316 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 Q8TCH9 128 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 STMN2Q93045 179 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 OR8B4Q96RC9 309 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 MNTQ99583 582 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 C7orf69Q9H7B7 122 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 ADGRL4Q9HBW9 690 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 S100A14Q9HCY8 104 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 USE1Q9NZ43 259 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 WARS2Q9UGM6 360 aaKnown RBP12.91□□□□□ -0.34
VARS-219ENST00000461328 ZNF391Q9UJN7 358 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 PPIAL4AQ9Y536 164 aa12.91□□□□□ -0.34
VARS-219ENST00000461328 ANXA2P2A6NMY6 339 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 ZNF254O75437 659 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 APOL3O95236 402 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 POU4F2Q12837 409 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 OR8B8Q15620 311 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 NLRC3Q7RTR2 1065 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 C1QL2Q7Z5L3 287 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 C19orf18Q8NEA5 215 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 RFKQ969G6 155 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 TBX5Q99593 518 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 C9orf16Q9BUW7 83 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 C1orf123Q9NWV4 160 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 CLN6Q9NWW5 311 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 FAM206AQ9NX38 181 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 RNF7Q9UBF6 113 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 OR5V1Q9UGF6 321 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 RHBDD3Q9Y3P4 386 aa12.9□□□□□ -0.34
VARS-219ENST00000461328 STAB1Q9NY15 2570 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms