RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 HOXD4P09016 255 aaPredicted RBP7□□□□□ -1.29
SFPQ-202ENST00000460428 PATE4P0C8F1 98 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 GDNFP39905 211 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 SLC6A9P48067 706 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 INPP1P49441 399 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 FOXG1P55316 489 aaPredicted RBP7□□□□□ -1.29
SFPQ-202ENST00000460428 AP3S2P59780 193 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 RAB1AP62820 205 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 FAM3AP98173 230 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 FAPQ12884 760 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 UBE2V2Q15819 145 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 EIF2S3LQ2VIR3 472 aaKnown RBP7□□□□□ -1.29
SFPQ-202ENST00000460428 KRTCAP3Q53RY4 240 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 SFRP5Q5T4F7 317 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 C1QTNF12Q5T7M4 302 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 NSUN5P2Q63ZY6 315 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 ZNF324BQ6AW86 544 aaPredicted RBP7□□□□□ -1.29
SFPQ-202ENST00000460428 TMEM53Q6P2H8 277 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 INO80CQ6PI98 192 aaPredicted RBP7□□□□□ -1.29
SFPQ-202ENST00000460428 PLET1Q6UQ28 207 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 TFAP2EQ6VUC0 442 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 ANGPTL5Q86XS5 388 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 TOMM5Q8N4H5 51 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 FAM89BQ8N5H3 189 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 JAGN1Q8N5M9 183 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 SEMA6DQ8NFY4 1073 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 OR6K3Q8NGY3 331 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 MBD3L2Q8NHZ7 208 aaPredicted RBP7□□□□□ -1.29
SFPQ-202ENST00000460428 KCNG3Q8TAE7 436 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 NANOS1Q8WY41 292 aaKnown RBP7□□□□□ -1.29
SFPQ-202ENST00000460428 AQP3Q92482 292 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 AKAP1Q92667 903 aaKnown RBP eCLIP7□□□□□ -1.29
SFPQ-202ENST00000460428 POM121Q96HA1 1249 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 REEP6Q96HR9 211 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 POM121L2Q96KW2 1035 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 GPR137Q96N19 417 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 REPIN1Q9BWE0 567 aaKnown RBP7□□□□□ -1.29
SFPQ-202ENST00000460428 SCNM1Q9BWG6 230 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 ACTR6Q9GZN1 396 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 DPAGT1Q9H3H5 408 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 OPA3Q9H6K4 179 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 AUNIPQ9H7T9 357 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 NEK6Q9HC98 313 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7□□□□□ -1.29
SFPQ-202ENST00000460428 PLSCR4Q9NRQ2 329 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 PRSS50Q9UI38 385 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 CLEC4AQ9UMR7 237 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 LHX6Q9UPM6 363 aa7□□□□□ -1.29
SFPQ-202ENST00000460428 CNTRLQ7Z7A1 2325 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 ZNF503-AS2A6NEH8 195 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 WIPF3A6NGB9 483 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 HMX3A6NHT5 357 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 FOXI3A8MTJ6 420 aaPredicted RBP6.99□□□□□ -1.29
SFPQ-202ENST00000460428 MKRN2OSH3BPM6 223 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 RBBP9O75884 186 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 IGHV3-9P01782 118 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 LCATP04180 440 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 VSIG8P0DPA2 414 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 COX5AP20674 150 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 PRKACBP22694 351 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 ACKR3P25106 362 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 PRSS3P35030 304 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 KIR2DL2P43627 348 aaPredicted RBP6.99□□□□□ -1.29
SFPQ-202ENST00000460428 MECP2P51608 486 aaKnown RBP6.99□□□□□ -1.29
SFPQ-202ENST00000460428 FOXC1Q12948 553 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 SNTB2Q13425 540 aaKnown RBP6.99□□□□□ -1.29
SFPQ-202ENST00000460428 UNC119Q13432 240 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 MADCAM1Q13477 382 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 CNN3Q15417 329 aaKnown RBP6.99□□□□□ -1.29
SFPQ-202ENST00000460428 KISS1Q15726 138 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 ZNF260Q3ZCT1 412 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 ACSF3Q4G176 576 aaPredicted RBP6.99□□□□□ -1.29
SFPQ-202ENST00000460428 PLXDC2Q6UX71 529 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 Q6ZT83 130 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 P4HA3Q7Z4N8 544 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 ZNF584Q8IVC4 421 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 SPACA3Q8IXA5 215 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 IZUMO1Q8IYV9 350 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 DTX3Q8N9I9 347 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 C1orf162Q8NEQ5 155 aaPredicted RBP6.99□□□□□ -1.29
SFPQ-202ENST00000460428 Q8NFD4 153 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 PIGTQ969N2 578 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 APOBEC3DQ96AK3 386 aaPredicted RBP6.99□□□□□ -1.29
SFPQ-202ENST00000460428 SEH1LQ96EE3 360 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 CPNE2Q96FN4 548 aaPredicted RBP6.99□□□□□ -1.29
SFPQ-202ENST00000460428 TM2D1Q9BX74 207 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 LPAR5Q9H1C0 372 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 MMP28Q9H239 520 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 NOX3Q9HBY0 568 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 HRASLSQ9HDD0 168 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 ETAA1Q9NY74 926 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 NLKQ9UBE8 527 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 PIGLQ9Y2B2 252 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 NUBP2Q9Y5Y2 271 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 ZNF407Q9C0G0 2248 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 ARHGAP21Q5T5U3 1957 aa6.99□□□□□ -1.29
SFPQ-202ENST00000460428 GVINP1Q7Z2Y8 2422 aa6.98□□□□□ -1.29
SFPQ-202ENST00000460428 TRAV18A0A075B6X5 111 aa6.98□□□□□ -1.29
SFPQ-202ENST00000460428 A0A0B4J293 547 aa6.98□□□□□ -1.29
SFPQ-202ENST00000460428 LINC00854A0A1B0GVQ3 168 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms