RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 TMEM246Q9BRR3 403 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 OSBPL10Q9BXB5 764 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 SEMA6AQ9H2E6 1030 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 ZNF319Q9P2F9 582 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 RNF7Q9UBF6 113 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 hCG_38984A0A1B0GV85 526 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 A8MXK9 166 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 RPS2P15880 293 aaKnown RBP19.27■□□□□ 0.68
PTPN4-208ENST00000460289 GSK3AP49840 483 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 HCCSP53701 268 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 EFNB1P98172 346 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 GFOD2Q3B7J2 385 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 NXNL2Q5VZ03 156 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 C12orf73Q69YU5 71 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 C1orf229Q6ZS94 237 aaPredicted RBP19.27■□□□□ 0.68
PTPN4-208ENST00000460289 MEPCEQ7L2J0 689 aaKnown RBP19.27■□□□□ 0.68
PTPN4-208ENST00000460289 TCEANCQ8N8B7 351 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 NANPQ8TBE9 248 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 TMEM163Q8TC26 289 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 MROQ9BYG7 248 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 OCEL1Q9H607 264 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 ZNF391Q9UJN7 358 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 KLHDC2Q9Y2U9 406 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 LRP12Q9Y561 859 aa19.27■□□□□ 0.68
PTPN4-208ENST00000460289 LOC105371242A0A075B767 164 aa19.26■□□□□ 0.67
PTPN4-208ENST00000460289 CCDC182A6NF36 153 aa19.26■□□□□ 0.67
PTPN4-208ENST00000460289 SLC22A31A6NKX4 558 aa19.26■□□□□ 0.67
PTPN4-208ENST00000460289 MRPL3P09001 348 aaKnown RBP19.26■□□□□ 0.67
PTPN4-208ENST00000460289 EPHA2P29317 976 aa19.26■□□□□ 0.67
PTPN4-208ENST00000460289 PSMA6P60900 246 aaKnown RBP19.26■□□□□ 0.67
PTPN4-208ENST00000460289 ACTR3P61158 418 aa19.26■□□□□ 0.67
PTPN4-208ENST00000460289 SEC61A1P61619 476 aaKnown RBP19.26■□□□□ 0.67
PTPN4-208ENST00000460289 NLRC3Q7RTR2 1065 aa19.26■□□□□ 0.67
PTPN4-208ENST00000460289 C1QL2Q7Z5L3 287 aa19.26■□□□□ 0.67
PTPN4-208ENST00000460289 ASB17Q8WXJ9 295 aa19.26■□□□□ 0.67
PTPN4-208ENST00000460289 DVL3Q92997 716 aaPredicted RBP19.26■□□□□ 0.67
PTPN4-208ENST00000460289 NEIL1Q96FI4 390 aaPredicted RBP19.26■□□□□ 0.67
PTPN4-208ENST00000460289 CIB1Q99828 191 aa19.26■□□□□ 0.67
PTPN4-208ENST00000460289 OAZ3Q9UMX2 235 aa19.26■□□□□ 0.67
PTPN4-208ENST00000460289 ACOD1A6NK06 481 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 ZNF254O75437 659 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 GRPP07492 148 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 DCTDP32321 178 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 GNALP38405 381 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 KCNJ8Q15842 424 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 FAM201AQ5SY85 155 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 AADACL4Q5VUY2 407 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 DCDC5Q6ZRR9 648 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 C10orf67Q8IYJ2 551 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 PYDC1Q8WXC3 89 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 CNN2Q99439 309 aaKnown RBP19.25■□□□□ 0.67
PTPN4-208ENST00000460289 SSBP3Q9BWW4 388 aaPredicted RBP19.25■□□□□ 0.67
PTPN4-208ENST00000460289 MMP26Q9NRE1 261 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 C1orf123Q9NWV4 160 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 OR5V1Q9UGF6 321 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 WNK2Q9Y3S1 2297 aa19.25■□□□□ 0.67
PTPN4-208ENST00000460289 A0A0A6YYJ9 748 aa19.24■□□□□ 0.67
PTPN4-208ENST00000460289 TRAPPC2LH3BP13 241 aa19.24■□□□□ 0.67
PTPN4-208ENST00000460289 GNB2P62879 340 aa19.24■□□□□ 0.67
PTPN4-208ENST00000460289 ROM1Q03395 351 aa19.24■□□□□ 0.67
PTPN4-208ENST00000460289 OR8B8Q15620 311 aa19.24■□□□□ 0.67
PTPN4-208ENST00000460289 GID4Q8IVV7 300 aa19.24■□□□□ 0.67
PTPN4-208ENST00000460289 ZNF679Q8IYX0 411 aa19.24■□□□□ 0.67
PTPN4-208ENST00000460289 OR8B3Q8NGG8 313 aa19.24■□□□□ 0.67
PTPN4-208ENST00000460289 OR8B2Q96RD0 313 aa19.24■□□□□ 0.67
PTPN4-208ENST00000460289 MNTQ99583 582 aa19.24■□□□□ 0.67
PTPN4-208ENST00000460289 RBM4BQ9BQ04 359 aaKnown RBP19.24■□□□□ 0.67
PTPN4-208ENST00000460289 TRIM36Q9NQ86 728 aa19.24■□□□□ 0.67
PTPN4-208ENST00000460289 DNHD1Q96M86 4753 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 TMEM269A0A1B0GVZ9 245 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 A6NLC8 198 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 EBAG9O00559 213 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 PHYHO14832 338 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 ZNF12P17014 697 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 ZNF154Q13106 437 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 KRTAP24-1Q3LI83 254 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 ZFP1Q6P2D0 407 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 BCDIN3DQ7Z5W3 292 aaKnown RBP19.23■□□□□ 0.67
PTPN4-208ENST00000460289 PHC2Q8IXK0 858 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 DEFB108BQ8NET1 73 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 ZNF418Q8TF45 676 aaPredicted RBP19.23■□□□□ 0.67
PTPN4-208ENST00000460289 ITFG2Q969R8 447 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 OR8B4Q96RC9 309 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 IL4I1Q96RQ9 567 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 PAPOLGQ9BWT3 736 aaKnown RBP19.23■□□□□ 0.67
PTPN4-208ENST00000460289 GABARAPL3Q9BY60 117 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 ABCB9Q9NP78 766 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 HAO2Q9NYQ3 351 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 OPN4Q9UHM6 478 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 RHBDD3Q9Y3P4 386 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 INSIG2Q9Y5U4 225 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 MPC1Q9Y5U8 109 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 AUP1Q9Y679 476 aa19.23■□□□□ 0.67
PTPN4-208ENST00000460289 ARHGAP32A7KAX9 2087 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 SAC3D1A6NKF1 404 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 ANXA2P2A6NMY6 339 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 M0R129 80 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 LGALS8O00214 317 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 NDUFA2O43678 99 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 ADRA2CP18825 462 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms