RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 LOC110117498-PIK3R3F6TDL0 507 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 LALBAP00709 142 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 LCATP04180 440 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 SLC25A16P16260 332 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 JUNBP17275 347 aaPredicted RBP13.32□□□□□ -0.28
SDF4-204ENST00000459994 PSMB10P40306 273 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 WNT5AP41221 380 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 SLC6A9P48067 706 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 MFGE8Q08431 387 aaPredicted RBP13.32□□□□□ -0.28
SDF4-204ENST00000459994 ALKBH1Q13686 389 aaKnown RBP13.32□□□□□ -0.28
SDF4-204ENST00000459994 DOC2BQ14184 412 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 CARTPTQ16568 116 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 NAA40Q86UY6 237 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 LRP11Q86VZ4 500 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 CATSPERDQ86XM0 798 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 C1orf174Q8IYL3 243 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 OR52H1Q8NGJ2 320 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 APOBEC3DQ96AK3 386 aaPredicted RBP13.32□□□□□ -0.28
SDF4-204ENST00000459994 MGLLQ99685 303 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 MRPL37Q9BZE1 423 aaKnown RBP13.32□□□□□ -0.28
SDF4-204ENST00000459994 MYEF2Q9P2K5 600 aaKnown RBP13.32□□□□□ -0.28
SDF4-204ENST00000459994 OR52A1Q9UKL2 312 aa13.32□□□□□ -0.28
SDF4-204ENST00000459994 A8MV72 311 aaPredicted RBP13.31□□□□□ -0.28
SDF4-204ENST00000459994 LYNX1G3V0Z9 82 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 CD1AP06126 327 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 ANXA2P07355 339 aaKnown RBP13.31□□□□□ -0.28
SDF4-204ENST00000459994 LYNX1P0DP58 116 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 SLC2A1P11166 492 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 ATP6V1B1P15313 513 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 NR4A1P22736 598 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 TUBG1P23258 451 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 RAD52P43351 418 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 PPOXP50336 477 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 PDLIM4P50479 330 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 GTF2A1P52655 376 aaPredicted RBP13.31□□□□□ -0.28
SDF4-204ENST00000459994 UCP2P55851 309 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 NANOS3P60323 173 aaKnown RBP13.31□□□□□ -0.28
SDF4-204ENST00000459994 MLLT11Q13015 90 aaPredicted RBP13.31□□□□□ -0.28
SDF4-204ENST00000459994 GPR50Q13585 617 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 TPBGQ13641 420 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 CDK5R1Q15078 307 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 SYT6Q5T7P8 510 aaPredicted RBP13.31□□□□□ -0.28
SDF4-204ENST00000459994 DMKNQ6E0U4 476 aaPredicted RBP13.31□□□□□ -0.28
SDF4-204ENST00000459994 FAM57BQ71RH2 274 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 ELMOD2Q8IZ81 293 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 PRSS35Q8N3Z0 413 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 PGAM5Q96HS1 289 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 BCL2L14Q9BZR8 327 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 PBOV1Q9GZY1 135 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 TPK1Q9H3S4 243 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 TUBG2Q9NRH3 451 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 FRRS1LQ9P0K9 344 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 FZR1Q9UM11 496 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 SPEF1Q9Y4P9 236 aa13.31□□□□□ -0.28
SDF4-204ENST00000459994 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.3□□□□□ -0.281e-16■■■□□ 18.3
SDF4-204ENST00000459994 A0A0U1RQV5 110 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 OR4C45A6NMZ5 311 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 INMTO95050 263 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 CLPTM1O96005 669 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 NGFP01138 241 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 BMP4P12644 408 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 USF1P22415 310 aaPredicted RBP13.3□□□□□ -0.28
SDF4-204ENST00000459994 NR4A2P43354 598 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 KIR3DL2P43630 455 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 NEDD8Q15843 81 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 TIGD6Q17RP2 521 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 WDR38Q5JTN6 314 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 BCL2L15Q5TBC7 163 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 ZNF101Q8IZC7 436 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 OR8B12Q8NGG6 310 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 OR5L1Q8NGL2 311 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 ITFG2Q969R8 447 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 MUL1Q969V5 352 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 OPALINQ96PE5 141 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 BPESC1Q9GZL8 116 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 OR10A2Q9H208 303 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 RGCCQ9H4X1 137 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 BRD7Q9NPI1 651 aa13.3□□□□□ -0.28
SDF4-204ENST00000459994 SIRT4Q9Y6E7 314 aaPredicted RBP13.3□□□□□ -0.28
SDF4-204ENST00000459994 TRBV2A0A0J9YWF9 115 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 TMEM212A6NML5 194 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 XRCC2O43543 280 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 PLPP2O43688 288 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 TTRP02766 147 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 CSF3P09919 207 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 HSMCR30P0CW71 290 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 IL2RGP31785 369 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 SNAI3Q3KNW1 292 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 ARMCX4Q5H9R4 360 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 IL17RELQ6ZVW7 336 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 RFPL4BQ6ZWI9 263 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 PPP1R14AQ96A00 147 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 SGK3Q96BR1 496 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 SMIM19Q96E16 107 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 SYT3Q9BQG1 590 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 PIMREGQ9BSJ6 248 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 ZNF319Q9P2F9 582 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 SCOCQ9UIL1 159 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 ZNF391Q9UJN7 358 aa13.29□□□□□ -0.28
SDF4-204ENST00000459994 GTF2A1LQ9UNN4 478 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms