RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 SIGLEC11Q96RL6 698 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 RAB26Q9ULW5 256 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 J3QRE1 110 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 GATBO75879 557 aaKnown RBP9.09□□□□□ -0.95
UBR4-208ENST00000459947 CCL1P22362 96 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 TGM4P49221 684 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 ISL1P61371 349 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 RIN1Q13671 783 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 HLXQ14774 488 aaPredicted RBP9.09□□□□□ -0.95
UBR4-208ENST00000459947 CCDC58Q4VC31 144 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 ZNF684Q5T5D7 378 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 BCDIN3DQ7Z5W3 292 aaKnown RBP9.09□□□□□ -0.95
UBR4-208ENST00000459947 OR5AS1Q8N127 324 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 OR10Z1Q8NGY1 313 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 FBLIM1Q8WUP2 373 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 MYDGFQ969H8 173 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 TMEM80Q96HE8 168 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 COMMD4Q9H0A8 199 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 GNG8Q9UK08 70 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 TPRKBQ9Y3C4 175 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 RP2O75695 350 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 IGLV3-1P01715 115 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 HPXP02790 462 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 LIPNQ5VXI9 398 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 ALG8Q9BVK2 526 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 GTF2A1LQ9UNN4 478 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 PPP1R3CQ9UQK1 317 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 N6AMT1Q9Y5N5 214 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 NAV2Q8IVL1 2488 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 PPIHO43447 177 aaKnown RBP9.08□□□□□ -0.96
UBR4-208ENST00000459947 FAM20BO75063 409 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 SRSF10O75494 262 aaKnown RBP9.08□□□□□ -0.96
UBR4-208ENST00000459947 SERPINA3P01011 423 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 MAGEB1P43366 347 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 CCL8P80075 99 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 ZNF85Q03923 595 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 ZDHHC23Q8IYP9 409 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 OR52N1Q8NH53 320 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 ITLN1Q8WWA0 313 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 CPNE2Q96FN4 548 aaPredicted RBP9.08□□□□□ -0.96
UBR4-208ENST00000459947 OR2V2Q96R30 315 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 MSL2Q9HCI7 577 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 TMEM106BQ9NUM4 274 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 RRP15Q9Y3B9 282 aaKnown RBP9.08□□□□□ -0.96
UBR4-208ENST00000459947 NDUFS7O75251 213 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 SLC2A1P11166 492 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 ALKBH6Q3KRA9 238 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 RNLSQ5VYX0 342 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 CYB5R2Q6BCY4 276 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 PLEKHA1Q9HB21 404 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 BRD7Q9NPI1 651 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 ZNF275Q9NSD4 429 aaPredicted RBP9.08□□□□□ -0.96
UBR4-208ENST00000459947 NKX1-2Q9UD57 310 aaPredicted RBP9.08□□□□□ -0.96
UBR4-208ENST00000459947 NPTNQ9Y639 398 aa9.08□□□□□ -0.96
UBR4-208ENST00000459947 IGHV4-30-2A0A087WSY4 118 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 TMEM212A6NML5 194 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 NDUFA2O43678 99 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 NCR1O76036 304 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 C11orf91Q3C1V1 193 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 OR52I1Q8NGK6 324 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 OR2AE1Q8NHA4 323 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 C1orf159Q96HA4 380 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 TBX5Q99593 518 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 PAPOLGQ9BWT3 736 aaKnown RBP9.07□□□□□ -0.96
UBR4-208ENST00000459947 ERVK13-1Q9NX77 482 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 TANC2Q9HCD6 1990 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 MRPS14O60783 128 aaKnown RBP9.07□□□□□ -0.96
UBR4-208ENST00000459947 ISG15P05161 165 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 MYF6P23409 242 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 CLVS2Q5SYC1 327 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 Q6ZR03 302 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 NAA40Q86UY6 237 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 APH1BQ8WW43 257 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 ANKRD60Q9BZ19 345 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 G6PC2Q9NQR9 355 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 GPR84Q9NQS5 396 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 RNF7Q9UBF6 113 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 LPAR3Q9UBY5 353 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 V9GYS6 101 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 SYT7O43581 403 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 CD5LO43866 347 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 WBP4O75554 376 aaKnown RBP9.07□□□□□ -0.96
UBR4-208ENST00000459947 MDH2P40926 338 aaKnown RBP9.07□□□□□ -0.96
UBR4-208ENST00000459947 RANBP1P43487 201 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 CNN3Q15417 329 aaKnown RBP9.07□□□□□ -0.96
UBR4-208ENST00000459947 STX19Q8N4C7 294 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 OR5A2Q8NGI9 324 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 PP6455Q8WZ26 134 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 TMEM160Q9NX00 188 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 HHLA2Q9UM44 414 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 SLC7A11Q9UPY5 501 aa9.07□□□□□ -0.96
UBR4-208ENST00000459947 RNF223E7ERA6 249 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 TTRP02766 147 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 ALKBH1Q13686 389 aaKnown RBP9.06□□□□□ -0.96
UBR4-208ENST00000459947 GFOD2Q3B7J2 385 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 RPL22L1Q6P5R6 122 aaKnown RBP9.06□□□□□ -0.96
UBR4-208ENST00000459947 YIPF5Q969M3 257 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 CA6P23280 308 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 HCCSP53701 268 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 GNG3P63215 75 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms