RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 MRPL15Q9P015 296 aaKnown RBP15.72■□□□□ 0.11
USP39-209ENST00000458268 TMEM14AQ9Y6G1 99 aa15.72■□□□□ 0.11
USP39-209ENST00000458268 TRAV20A0A0B4J274 112 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 hCG_38984A0A1B0GV85 526 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 TMEM269A0A1B0GVZ9 245 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 IFNL4K9M1U5 179 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 GMDSO60547 372 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 RPS2P15880 293 aaKnown RBP15.71■□□□□ 0.11
USP39-209ENST00000458268 CFL1P23528 166 aaKnown RBP15.71■□□□□ 0.11
USP39-209ENST00000458268 CD80P33681 288 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 CD200P41217 278 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 RIDAP52758 137 aaKnown RBP15.71■□□□□ 0.11
USP39-209ENST00000458268 SEC61A1P61619 476 aaKnown RBP15.71■□□□□ 0.11
USP39-209ENST00000458268 ZNF322Q6U7Q0 402 aaPredicted RBP15.71■□□□□ 0.11
USP39-209ENST00000458268 PRSS45Q7RTY3 260 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 SPSB4Q96A44 273 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 APOL4Q9BPW4 351 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 PPP1R3EQ9H7J1 279 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 NIPAL2Q9H841 368 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 ADGRL4Q9HBW9 690 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 WNK2Q9Y3S1 2297 aa15.71■□□□□ 0.11
USP39-209ENST00000458268 PPIAL4EA0A075B759 164 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 PPIAL4DF5H284 164 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 ALPLP05186 524 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 PPIAL4FP0DN26 164 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 DDOSTP39656 456 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 ALDH3A2P51648 485 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 KRTAP21-3Q3LHN1 58 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 DCAF12L2Q5VW00 463 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 ZNF826PQ6ZT77 177 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 KCTD8Q6ZWB6 473 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 LRRC28Q86X40 367 aaPredicted RBP15.7■□□□□ 0.1
USP39-209ENST00000458268 MUC20Q8N307 709 aaPredicted RBP15.7■□□□□ 0.1
USP39-209ENST00000458268 OR10H4Q8NGA5 316 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 ASB17Q8WXJ9 295 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 PIGCQ92535 297 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 FAM71F1Q96KD3 344 aaPredicted RBP15.7■□□□□ 0.1
USP39-209ENST00000458268 OR8B4Q96RC9 309 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 PATZ1Q9HBE1 687 aaKnown RBP15.7■□□□□ 0.1
USP39-209ENST00000458268 C14orf119Q9NWQ9 140 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 RHBDD3Q9Y3P4 386 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 PPIAL4AQ9Y536 164 aa15.7■□□□□ 0.1
USP39-209ENST00000458268 ANK3Q12955 4377 aaKnown RBP15.7■□□□□ 0.1
USP39-209ENST00000458268 ZNF850A8MQ14 1090 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 CEACAM18A8MTB9 384 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 PHF1O43189 567 aaPredicted RBP15.69■□□□□ 0.1
USP39-209ENST00000458268 RPP14O95059 124 aaKnown RBP15.69■□□□□ 0.1
USP39-209ENST00000458268 PNPP00491 289 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 GMFBP60983 142 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 SRSF2Q01130 221 aaKnown RBP15.69■□□□□ 0.1
USP39-209ENST00000458268 MFGE8Q08431 387 aaPredicted RBP15.69■□□□□ 0.1
USP39-209ENST00000458268 MZT1Q08AG7 82 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 OR8B8Q15620 311 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 ZNF829Q3KNS6 432 aaPredicted RBP15.69■□□□□ 0.1
USP39-209ENST00000458268 TMEM155Q4W5P6 130 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 ESCO2Q56NI9 601 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 SFRP4Q6FHJ7 346 aaPredicted RBP15.69■□□□□ 0.1
USP39-209ENST00000458268 RHOUQ7L0Q8 258 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 ZNF679Q8IYX0 411 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 PQLC1Q8N2U9 271 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 YIPF7Q8N8F6 280 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 OR8J1Q8NGP2 316 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 UBE2FQ969M7 185 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 PPP1R14AQ96A00 147 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 LYZL4Q96KX0 146 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 C9orf16Q9BUW7 83 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 PBOV1Q9GZY1 135 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 METTL17Q9H7H0 456 aaPredicted RBP15.69■□□□□ 0.1
USP39-209ENST00000458268 CLN6Q9NWW5 311 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 USE1Q9NZ43 259 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 RNF7Q9UBF6 113 aa15.69■□□□□ 0.1
USP39-209ENST00000458268 WARS2Q9UGM6 360 aaKnown RBP15.69■□□□□ 0.1
USP39-209ENST00000458268 A0A0G2JMP0 313 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 A0A0X1KG70 313 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 ANXA2P2A6NMY6 339 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 C3orf80F5H4A9 247 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 LOC110117498-PIK3R3F6TDL0 507 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 H3BSH0 61 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 PHYHO14832 338 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 PRDX4Q13162 271 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 ODF4Q2M2E3 257 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 FTMTQ8N4E7 242 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 CELF2-AS1Q8N7Q2 184 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 SPERTQ8NA61 448 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 CSNK2A3Q8NEV1 391 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 OR4M2Q8NGB6 313 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 EME1Q96AY2 570 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 TMEM246Q9BRR3 403 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 RGCCQ9H4X1 137 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 TMEM165Q9HC07 324 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 FAM206AQ9NX38 181 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 AASSQ9UDR5 926 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 GMPPBQ9Y5P6 360 aa15.68■□□□□ 0.1
USP39-209ENST00000458268 LOC105371242A0A075B767 164 aa15.67■□□□□ 0.1
USP39-209ENST00000458268 A0A1B0GWJ7 208 aa15.67■□□□□ 0.1
USP39-209ENST00000458268 ANKRD65E5RJM6 399 aa15.67■□□□□ 0.1
USP39-209ENST00000458268 FOXH1O75593 365 aa15.67■□□□□ 0.1
USP39-209ENST00000458268 RGS9O75916 674 aaPredicted RBP15.67■□□□□ 0.1
USP39-209ENST00000458268 ADRA2CP18825 462 aa15.67■□□□□ 0.1
USP39-209ENST00000458268 ACKR3P25106 362 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms