RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ZNF420Q8TAQ5 688 aaPredicted RBP19.53■□□□□ 0.72
CBX3-204ENST00000456948 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.53■□□□□ 0.72
CBX3-204ENST00000456948 EI24O14681 340 aa19.52■□□□□ 0.72
CBX3-204ENST00000456948 FSTL3O95633 263 aa19.52■□□□□ 0.72
CBX3-204ENST00000456948 GATA3P23771 443 aa19.52■□□□□ 0.72
CBX3-204ENST00000456948 POLR2IP36954 125 aaKnown RBP19.52■□□□□ 0.72
CBX3-204ENST00000456948 GSK3AP49840 483 aa19.52■□□□□ 0.72
CBX3-204ENST00000456948 MAB21L1Q13394 359 aa19.52■□□□□ 0.72
CBX3-204ENST00000456948 KCNJ8Q15842 424 aa19.52■□□□□ 0.72
CBX3-204ENST00000456948 SLC35F2Q8IXU6 374 aa19.52■□□□□ 0.72
CBX3-204ENST00000456948 Q8TCH9 128 aa19.52■□□□□ 0.72
CBX3-204ENST00000456948 OR8B4Q96RC9 309 aa19.52■□□□□ 0.72
CBX3-204ENST00000456948 CLN6Q9NWW5 311 aa19.52■□□□□ 0.72
CBX3-204ENST00000456948 KLHDC2Q9Y2U9 406 aa19.52■□□□□ 0.72
CBX3-204ENST00000456948 PPIAL4EA0A075B759 164 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 A0A0G2JMP0 313 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 A0A0X1KG70 313 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 ANXA2P2A6NMY6 339 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 PPIAL4DF5H284 164 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 M0R129 80 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 PPIAL4FP0DN26 164 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 HTR1FP30939 366 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 FAHD2BQ6P2I3 314 aaPredicted RBP19.51■□□□□ 0.71
CBX3-204ENST00000456948 ZNF322Q6U7Q0 402 aaPredicted RBP19.51■□□□□ 0.71
CBX3-204ENST00000456948 BCDIN3DQ7Z5W3 292 aaKnown RBP19.51■□□□□ 0.71
CBX3-204ENST00000456948 CBR4Q8N4T8 237 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 OR4M2Q8NGB6 313 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 FAM81AQ8TBF8 368 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 FAHD2AQ96GK7 314 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 SIGLEC11Q96RL6 698 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 PATZ1Q9HBE1 687 aaKnown RBP19.51■□□□□ 0.71
CBX3-204ENST00000456948 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.51■□□□□ 0.71
CBX3-204ENST00000456948 PPIAL4AQ9Y536 164 aa19.51■□□□□ 0.71
CBX3-204ENST00000456948 IGHV3-64DA0A0J9YX35 117 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 hCG_38984A0A1B0GV85 526 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 C5orf63A6NC05 138 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 PLPP2O43688 288 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 BAG2O95816 211 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 CYB5R3P00387 301 aaPredicted RBP19.5■□□□□ 0.71
CBX3-204ENST00000456948 CXCR4P61073 352 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 IL5RAQ01344 420 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 EGR3Q06889 387 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 ZMYND11Q15326 602 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 ZBTB49Q6ZSB9 765 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 COMMD2Q86X83 199 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 PQLC1Q8N2U9 271 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 OR51G2Q8NGK0 314 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 EME1Q96AY2 570 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 HRASLS5Q96KN8 279 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 HIST1H2AAQ96QV6 131 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 MICU1Q9BPX6 476 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 ADGRL4Q9HBW9 690 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 TRIM36Q9NQ86 728 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 UFSP2Q9NUQ7 469 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 DCAF16Q9NXF7 216 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 RNF7Q9UBF6 113 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 MIOXQ9UGB7 285 aa19.5■□□□□ 0.71
CBX3-204ENST00000456948 ANK3Q12955 4377 aaKnown RBP19.49■□□□□ 0.71
CBX3-204ENST00000456948 A0A0U1RQV5 110 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 A6NLC8 198 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 J3QLI3 93 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 PNPP00491 289 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 GRPP07492 148 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 OR2T7P0C7T2 308 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 ATP6V1B1P15313 513 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 THBS2P35442 1172 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 ESCO2Q56NI9 601 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 MEDAGQ5VYS4 303 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 ZNF771Q7L3S4 317 aaPredicted RBP19.49■□□□□ 0.71
CBX3-204ENST00000456948 NLRC3Q7RTR2 1065 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 OR2T27Q8NH04 317 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 PAPOLGQ9BWT3 736 aaKnown RBP19.49■□□□□ 0.71
CBX3-204ENST00000456948 MOB1AQ9H8S9 216 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 MPC1Q9Y5U8 109 aa19.49■□□□□ 0.71
CBX3-204ENST00000456948 PSMD9O00233 223 aa19.48■□□□□ 0.71
CBX3-204ENST00000456948 PTBP3O95758 552 aaKnown RBP19.48■□□□□ 0.71
CBX3-204ENST00000456948 KRT8P05787 483 aa19.48■□□□□ 0.71
CBX3-204ENST00000456948 MAP2K3P46734 347 aa19.48■□□□□ 0.71
CBX3-204ENST00000456948 OR8B8Q15620 311 aa19.48■□□□□ 0.71
CBX3-204ENST00000456948 DCAF12L2Q5VW00 463 aa19.48■□□□□ 0.71
CBX3-204ENST00000456948 PRAMEF6Q5VXH4 476 aa19.48■□□□□ 0.71
CBX3-204ENST00000456948 OR8B12Q8NGG6 310 aa19.48■□□□□ 0.71
CBX3-204ENST00000456948 MYCBPQ99417 103 aaPredicted RBP19.48■□□□□ 0.71
CBX3-204ENST00000456948 ZNF319Q9P2F9 582 aa19.48■□□□□ 0.71
CBX3-204ENST00000456948 MPZL2O60487 215 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 FAM20BO75063 409 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 MTRF1O75570 445 aaKnown RBP19.47■□□□□ 0.71
CBX3-204ENST00000456948 ZIK1Q3SY52 487 aaPredicted RBP19.47■□□□□ 0.71
CBX3-204ENST00000456948 THAP5Q7Z6K1 395 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 MDFIQ99750 246 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 PBOV1Q9GZY1 135 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 TMEM165Q9HC07 324 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 FAM206AQ9NX38 181 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 GTF2A1LQ9UNN4 478 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 COPS3Q9UNS2 423 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 LRCH1Q9Y2L9 728 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 GMPPBQ9Y5P6 360 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 WNK2Q9Y3S1 2297 aa19.47■□□□□ 0.71
CBX3-204ENST00000456948 PPIAL4CA0A0B4J2A2 164 aa19.46■□□□□ 0.71
CBX3-204ENST00000456948 hCG_1807616A0A1W2PRN6 198 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms