RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 hCG_1807616A0A1W2PRN6 198 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 A8MXK9 166 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 M0R129 80 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 PRKYO43930 277 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 RGS9O75916 674 aaPredicted RBP13.59□□□□□ -0.23
CPSF6-203ENST00000456847 GNALP38405 381 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 PSMA6P60900 246 aaKnown RBP13.59□□□□□ -0.23
CPSF6-203ENST00000456847 CCDC121Q6ZUS5 278 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 PRSS45Q7RTY3 260 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 DEFB108BQ8NET1 73 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 ZNF418Q8TF45 676 aaPredicted RBP13.59□□□□□ -0.23
CPSF6-203ENST00000456847 DUS3LQ96G46 650 aaKnown RBP13.59□□□□□ -0.23
CPSF6-203ENST00000456847 MRI1Q9BV20 369 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 C19orf24Q9BVV8 132 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 YIPF3Q9GZM5 350 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 SEMA6AQ9H2E6 1030 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 NIPAL2Q9H841 368 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 C1orf123Q9NWV4 160 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 H2AFY2Q9P0M6 372 aaPredicted RBP13.59□□□□□ -0.23
CPSF6-203ENST00000456847 LRP12Q9Y561 859 aa13.59□□□□□ -0.23
CPSF6-203ENST00000456847 PPIAL4CA0A0B4J2A2 164 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 CCDC182A6NF36 153 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 WNT2P09544 360 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 CD80P33681 288 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 GSK3AP49840 483 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 HCCSP53701 268 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 SLX4IPQ5VYV7 408 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 KCTD18Q6PI47 426 aaPredicted RBP13.58□□□□□ -0.23
CPSF6-203ENST00000456847 TCEANCQ8N8B7 351 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 TEAD3Q99594 435 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 PAPOLGQ9BWT3 736 aaKnown RBP13.58□□□□□ -0.23
CPSF6-203ENST00000456847 TTTY10Q9BZA0 68 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 RGCCQ9H4X1 137 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 MMP26Q9NRE1 261 aa13.58□□□□□ -0.23
CPSF6-203ENST00000456847 TRAPPC2LH3BP13 241 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 ZNF12P17014 697 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 ALOX5APP20292 161 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 CPT2P23786 658 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 OR8B8Q15620 311 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 SNCBQ16143 134 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 ARMCX4Q5H9R4 360 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 KDM4DQ6B0I6 523 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 DCDC5Q6ZRR9 648 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 FTMTQ8N4E7 242 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 PLPP7Q8NBV4 271 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 CSNK2A3Q8NEV1 391 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 CNN2Q99439 309 aaKnown RBP13.58□□□□□ -0.24
CPSF6-203ENST00000456847 ZNF319Q9P2F9 582 aa13.58□□□□□ -0.24
CPSF6-203ENST00000456847 FBN1P35555 2871 aaKnown RBP13.58□□□□□ -0.24
CPSF6-203ENST00000456847 ZAR1LA6NP61 321 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 PSMD9O00233 223 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 PITPNBP48739 271 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 ZNF154Q13106 437 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 KCNJ8Q15842 424 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 OR8B12Q8NGG6 310 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 CENPNQ96H22 339 aaPredicted RBP13.57□□□□□ -0.24
CPSF6-203ENST00000456847 CIB1Q99828 191 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 OPN4Q9UHM6 478 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 IKZF2Q9UKS7 526 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 POLR3KQ9Y2Y1 108 aaPredicted RBP13.57□□□□□ -0.24
CPSF6-203ENST00000456847 INSIG2Q9Y5U4 225 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 AUP1Q9Y679 476 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 TMEM14AQ9Y6G1 99 aa13.57□□□□□ -0.24
CPSF6-203ENST00000456847 SAC3D1A6NKF1 404 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 LGALS8O00214 317 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 FSTL3O95633 263 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 PTBP3O95758 552 aaKnown RBP13.56□□□□□ -0.24
CPSF6-203ENST00000456847 EPHA2P29317 976 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 HOXA4Q00056 320 aaPredicted RBP13.56□□□□□ -0.24
CPSF6-203ENST00000456847 C12orf73Q69YU5 71 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 SFRP4Q6FHJ7 346 aaPredicted RBP13.56□□□□□ -0.24
CPSF6-203ENST00000456847 BTNL3Q6UXE8 466 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 ZNF826PQ6ZT77 177 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 BCDIN3DQ7Z5W3 292 aaKnown RBP13.56□□□□□ -0.24
CPSF6-203ENST00000456847 COMMD2Q86X83 199 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 BPIFB2Q8N4F0 458 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 TMEM163Q8TC26 289 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 PYDC1Q8WXC3 89 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 IL4I1Q96RQ9 567 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 MROQ9BYG7 248 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 RIBC2Q9H4K1 309 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 CLN8Q9UBY8 286 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 OAZ3Q9UMX2 235 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 DOCK11Q5JSL3 2073 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 A0A0A6YYJ9 748 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 SLC22A31A6NKX4 558 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 ANXA2P2A6NMY6 339 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 C3orf80F5H4A9 247 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 NXNL2Q5VZ03 156 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 LYPD2Q6UXB3 125 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 ASRGL1Q7L266 308 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 MEPCEQ7L2J0 689 aaKnown RBP13.56□□□□□ -0.24
CPSF6-203ENST00000456847 FAM81AQ8TBF8 368 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 ASB17Q8WXJ9 295 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 TECTBQ96PL2 329 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 MICU1Q9BPX6 476 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 TRIM36Q9NQ86 728 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 RHBDD3Q9Y3P4 386 aa13.56□□□□□ -0.24
CPSF6-203ENST00000456847 GID4Q8IVV7 300 aa13.55□□□□□ -0.24
CPSF6-203ENST00000456847 SLC35F2Q8IXU6 374 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms