RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TP53I3Q53FA7 332 aa23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 LAIR2Q6ISS4 152 aa23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 THAP5Q7Z6K1 395 aa23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 RORBQ92753 470 aa23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 OR2V2Q96R30 315 aa23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 SOX7Q9BT81 388 aa23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 BPESC1Q9GZL8 116 aa23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 INPP5EQ9NRR6 644 aa23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 ZNF275Q9NSD4 429 aaPredicted RBP23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 GNG8Q9UK08 70 aa23.71■■□□□ 1.39
SMARCC1-203ENST00000454240 TNFRSF1AP19438 455 aa23.7■■□□□ 1.38
SMARCC1-203ENST00000454240 CA6P23280 308 aa23.7■■□□□ 1.38
SMARCC1-203ENST00000454240 TMEM33P57088 247 aa23.7■■□□□ 1.38
SMARCC1-203ENST00000454240 GALEQ14376 348 aa23.7■■□□□ 1.38
SMARCC1-203ENST00000454240 LHFPL3Q86UP9 236 aa23.7■■□□□ 1.38
SMARCC1-203ENST00000454240 ELMOD2Q8IZ81 293 aa23.7■■□□□ 1.38
SMARCC1-203ENST00000454240 ITLN1Q8WWA0 313 aa23.7■■□□□ 1.38
SMARCC1-203ENST00000454240 ITFG2Q969R8 447 aa23.7■■□□□ 1.38
SMARCC1-203ENST00000454240 RNF166Q96A37 237 aaPredicted RBP23.7■■□□□ 1.38
SMARCC1-203ENST00000454240 CACNG2Q9Y698 323 aa23.7■■□□□ 1.38
SMARCC1-203ENST00000454240 F5H5P2 479 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 GMDSO60547 372 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 INHBBP09529 407 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 TACSTD2P09758 323 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 ACKR3P25106 362 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 OR12D2P58182 307 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 BCL2L15Q5TBC7 163 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 FAM220AQ7Z4H9 259 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 CATSPERDQ86XM0 798 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 EGFL6Q8IUX8 553 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 CSNK2A3Q8NEV1 391 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 OR51E1Q8TCB6 317 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 MEGF10Q96KG7 1140 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 JAM3Q9BX67 310 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 ACOXLQ9NUZ1 547 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 ERVK13-1Q9NX77 482 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 GTF2A1LQ9UNN4 478 aa23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 NOP16Q9Y3C1 178 aaKnown RBP23.69■■□□□ 1.38
SMARCC1-203ENST00000454240 SMAD7O15105 426 aaKnown RBP23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 SRP9P49458 86 aaKnown RBP23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 ACTA2P62736 377 aa23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 ACTG2P63267 376 aa23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 LOXL1Q08397 574 aaPredicted RBP23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 MAB21L1Q13394 359 aa23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 OR8G1Q15617 311 aa23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 HFEQ30201 348 aa23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 KLBQ86Z14 1044 aa23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 MRPL48Q96GC5 212 aaKnown RBP23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 MYCBPQ99417 103 aaPredicted RBP23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 ALG8Q9BVK2 526 aa23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 GPR84Q9NQS5 396 aa23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 SLC22A13Q9Y226 551 aa23.68■■□□□ 1.38
SMARCC1-203ENST00000454240 IRGMA1A4Y4 181 aa23.67■■□□□ 1.38
SMARCC1-203ENST00000454240 ANKRD30BLA7E2S9 258 aa23.67■■□□□ 1.38
SMARCC1-203ENST00000454240 DCKP27707 260 aa23.67■■□□□ 1.38
SMARCC1-203ENST00000454240 CD200P41217 278 aa23.67■■□□□ 1.38
SMARCC1-203ENST00000454240 SNCBQ16143 134 aa23.67■■□□□ 1.38
SMARCC1-203ENST00000454240 IZUMO2Q6UXV1 221 aa23.67■■□□□ 1.38
SMARCC1-203ENST00000454240 CELF2-AS1Q8N7Q2 184 aa23.67■■□□□ 1.38
SMARCC1-203ENST00000454240 MAPK1IP1LQ8NDC0 245 aa23.67■■□□□ 1.38
SMARCC1-203ENST00000454240 ADAT1Q9BUB4 502 aaKnown RBP23.67■■□□□ 1.38
SMARCC1-203ENST00000454240 PLCXD1Q9NUJ7 323 aa23.67■■□□□ 1.38
SMARCC1-203ENST00000454240 TREM2Q9NZC2 230 aa23.67■■□□□ 1.38
SMARCC1-203ENST00000454240 ATP6V1B1P15313 513 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 USF1P22415 310 aaPredicted RBP23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 PSMB10P40306 273 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 FDX2Q6P4F2 183 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 KRT74Q7RTS7 529 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 LURAP1LQ8IV03 231 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 SYS1Q8N2H4 156 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 PLPP7Q8NBV4 271 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 CCL17Q92583 94 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 GGHQ92820 318 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 C4orf36Q96KX1 117 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 GCM1Q9NP62 436 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 RHBDD3Q9Y3P4 386 aa23.66■■□□□ 1.38
SMARCC1-203ENST00000454240 A0A1B0GTI1 187 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 J3QLW9 94 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 RRP9O43818 475 aaKnown RBP23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 LIMS3P0CW19 117 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 LIMS4P0CW20 117 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 ZNF19P17023 458 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 GPR6P46095 362 aaPredicted RBP23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 MAP2K3P46734 347 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 Q6ZSR3 168 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 COMMD2Q86X83 199 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 PRSS35Q8N3Z0 413 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 FTMTQ8N4E7 242 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 SPERTQ8NA61 448 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 PELI1Q96FA3 418 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 PPP1R3CQ9UQK1 317 aa23.65■■□□□ 1.38
SMARCC1-203ENST00000454240 IGHV4-61A0A0C4DH41 118 aa23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 PPIHO43447 177 aaKnown RBP23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 PTBP3O95758 552 aaKnown RBP23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 CST4P01036 141 aa23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 VHLP40337 213 aa23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 GATA4P43694 442 aa23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 HSPA13P48723 471 aa23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 WDR38Q5JTN6 314 aa23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 DVL3Q92997 716 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms