RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ZNF121P58317 390 aaPredicted RBP12.76□□□□□ -0.37
CHD3-205ENST00000449744 CDK5Q00535 292 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 PAX8Q06710 450 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 OR8B8Q15620 311 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 GFOD2Q3B7J2 385 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 SFRP4Q6FHJ7 346 aaPredicted RBP12.76□□□□□ -0.37
CHD3-205ENST00000449744 LYPD2Q6UXB3 125 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 RHOUQ7L0Q8 258 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 SLC16A9Q7RTY1 509 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 CPOQ8IVL8 374 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 ZNF454Q8N9F8 522 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 SGK3Q96BR1 496 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 MS4A7Q9GZW8 240 aaPredicted RBP12.76□□□□□ -0.37
CHD3-205ENST00000449744 TRIM36Q9NQ86 728 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 C1orf123Q9NWV4 160 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 FAM53CQ9NYF3 392 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 ERVK-18Q9QC07 812 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 TRAV38-1A0A0B4J264 116 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 PHYHO14832 338 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 SELENOFO60613 162 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 GNALP38405 381 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 OPRL1P41146 370 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 FAM3AP98173 230 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 SNCBQ16143 134 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 SLC35D3Q5M8T2 416 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 WDR25Q64LD2 544 aaPredicted RBP12.75□□□□□ -0.37
CHD3-205ENST00000449744 PAPD5Q8NDF8 572 aaKnown RBP12.75□□□□□ -0.37
CHD3-205ENST00000449744 OTOSQ8NHW6 89 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 DNAJC9Q8WXX5 260 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 TECTBQ96PL2 329 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 AMELYQ99218 206 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 NUDT16L1Q9BRJ7 211 aaKnown RBP12.75□□□□□ -0.37
CHD3-205ENST00000449744 ZNF69Q9UC07 566 aa12.75□□□□□ -0.37
CHD3-205ENST00000449744 KIR2DS1A0A191URI9 304 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 hCG_38984A0A1B0GV85 526 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 GSC2O15499 205 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 NDUFA2O43678 99 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 PPIAL4GP0DN37 164 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 NAA10P41227 235 aaPredicted RBP12.74□□□□□ -0.37
CHD3-205ENST00000449744 NPY4RP50391 375 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 PAX2Q02962 417 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 SNAPC1Q16533 368 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 KLF17Q5JT82 389 aaPredicted RBP12.74□□□□□ -0.37
CHD3-205ENST00000449744 TMEM236Q5W0B7 351 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 ZNF826PQ6ZT77 177 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 PARP8Q8N3A8 854 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 FTMTQ8N4E7 242 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 SIGLECL1Q8N7X8 197 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 ZDHHC22Q8N966 263 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 CSNK2A3Q8NEV1 391 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 NRBF2Q96F24 287 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 RGCCQ9H4X1 137 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 SLC25A19Q9HC21 320 aa12.74□□□□□ -0.37
CHD3-205ENST00000449744 PAPOLBQ9NRJ5 636 aaKnown RBP12.74□□□□□ -0.37
CHD3-205ENST00000449744 TMEM89A2RUT3 159 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 OOEPA6NGQ2 149 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 ANXA2P2A6NMY6 339 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 ADAM20O43506 726 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 ENSAO43768 121 aaKnown RBP12.73□□□□□ -0.37
CHD3-205ENST00000449744 TIPRLO75663 272 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 PSMB10P40306 273 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 GSK3AP49840 483 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 RASSF2P50749 326 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 UBA52P62987 128 aaKnown RBP12.73□□□□□ -0.37
CHD3-205ENST00000449744 HOXA4Q00056 320 aaPredicted RBP12.73□□□□□ -0.37
CHD3-205ENST00000449744 CD276Q5ZPR3 534 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 DOK3Q7L591 496 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 PRSS45Q7RTY3 260 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 KRT77Q7Z794 578 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 UPRTQ96BW1 309 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 PAPOLGQ9BWT3 736 aaKnown RBP12.73□□□□□ -0.37
CHD3-205ENST00000449744 CADM1Q9BY67 442 aaKnown RBP12.73□□□□□ -0.37
CHD3-205ENST00000449744 NIPAL2Q9H841 368 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 ESM1Q9NQ30 184 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 TVP23BQ9NYZ1 205 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 LAMP5Q9UJQ1 280 aa12.73□□□□□ -0.37
CHD3-205ENST00000449744 IGHV3OR16-10A0A075B7F0 116 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 TRAV40A0A0B4J280 105 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 MTNR1AP48039 350 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 CRISP1P54107 249 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 IL5RAQ01344 420 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 APOFQ13790 326 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 LCN1P1Q5VSP4 162 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 ZNF841Q6ZN19 808 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 BCL6BQ8N143 479 aaPredicted RBP12.72□□□□□ -0.37
CHD3-205ENST00000449744 GCSAMQ8N6F7 178 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 BBS1Q8NFJ9 593 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 OR5K1Q8NHB7 308 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 MICU1Q9BPX6 476 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 PRRG3Q9BZD7 231 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 RNPEPL1Q9HAU8 725 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 ZNF319Q9P2F9 582 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 CTSZQ9UBR2 303 aa12.72□□□□□ -0.37
CHD3-205ENST00000449744 GYPAP02724 150 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 IGHV4-38-2P0DP08 117 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 COMPP49747 757 aaPredicted RBP12.71□□□□□ -0.37
CHD3-205ENST00000449744 PSMA6P60900 246 aaKnown RBP12.71□□□□□ -0.37
CHD3-205ENST00000449744 BNIP1Q12981 228 aa12.71□□□□□ -0.37
CHD3-205ENST00000449744 BAMBIQ13145 260 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms