RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ONECUT2O95948 504 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 MMP15P51511 669 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ALDH3A2P51648 485 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 RPL18Q07020 188 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 PAGE3Q5JUK9 113 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 MOGAT3Q86VF5 341 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 WDFY1Q8IWB7 410 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 CBR4Q8N4T8 237 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 IL22RA2Q969J5 263 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 EXOSC3Q9NQT5 275 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 KIAA1324LA8MWY0 1029 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 GABARAPH6UMI1 98 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 HMGN4O00479 90 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 GABARAPO95166 117 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ARSBP15848 533 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF385BQ569K4 471 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 VWA1Q6PCB0 445 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 CBLN3Q6UW01 205 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 NOXO1Q8NFA2 376 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 CORO2AQ92828 525 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 TOMM40LQ969M1 308 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ADIPOR1Q96A54 375 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 MOB3AQ96BX8 217 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 SSBP3Q9BWW4 388 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZCCHC4Q9H5U6 513 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 WDR76Q9H967 626 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 PLEKHJ1Q9NW61 149 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF230Q9UIE0 474 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 SSUH2Q9Y2M2 353 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 EXOSC1Q9Y3B2 195 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 CDHR4A6H8M9 788 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF99A8MXY4 864 aaPredicted RBP4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 TMEM229AB2RXF0 380 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 AKR1C4P17516 323 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 RHOBP62745 196 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 ADARB1P78563 741 aaKnown RBP4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 PSG6Q00889 435 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 SKP2Q13309 424 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 AARDQ4LEZ3 155 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 HIKESHIQ53FT3 197 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF57Q68EA5 555 aaPredicted RBP4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR52W1Q6IF63 320 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR5D13Q8NGL4 314 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR2T11Q8NH01 316 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR1F12Q8NHA8 337 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 SNX22Q96L94 193 aa4.96□□□□□ -1.61
CDC42BPA-209ENST00000448940 PHF3Q92576 2039 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 hADV38S2A0JD32 116 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 ANKRD65E5RJM6 399 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 HRKO00198 91 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 TM4SF5O14894 197 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF207O43670 478 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 GLI4P10075 376 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF239Q16600 458 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 AWAT2Q6E213 333 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR2T2Q6IF00 324 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC35F2Q8IXU6 374 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 PQLC1Q8N2U9 271 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 SEMA6DQ8NFY4 1073 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 UQCC2Q9BRT2 126 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 C1orf123Q9NWV4 160 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 INSIG2Q9Y5U4 225 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 POLQO75417 2590 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 MAGEA13PA6NCF6 341 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 TO15178 435 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 GATCO43716 136 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 CTSBP07858 339 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 PRKACAP17612 351 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 TSPAN31Q12999 210 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 RNF220Q5VTB9 566 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 COX15Q7KZN9 410 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 TMEM52Q8NDY8 209 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 KBTBD8Q8NFY9 601 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 NMNAT3Q96T66 252 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 FEVQ99581 238 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 PRR14Q9BWN1 585 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 GAL3ST2Q9H3Q3 398 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 PLAC1Q9HBJ0 212 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF224Q9NZL3 707 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 TMEM72A0PK05 275 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 HPNP05981 417 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 THBDP07204 575 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 ADH4P08319 380 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 OSMP13725 252 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF32P17041 273 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 CMPK2Q5EBM0 449 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 ELFN2Q5R3F8 820 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 LIN54Q6MZP7 749 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 EGFL6Q8IUX8 553 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR51T1Q8NGJ9 327 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 BORCS5Q969J3 196 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 UCN2Q96RP3 112 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 MYRFQ9Y2G1 1151 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 MDFIC2A0A1B0GVS7 189 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 NGFRP08138 427 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF141Q15928 474 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 EMC4Q5J8M3 183 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC25A30Q5SVS4 291 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 FAHD1Q6P587 224 aa4.96□□□□□ -1.62
CDC42BPA-209ENST00000448940 IZUMO2Q6UXV1 221 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms