RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 IL20Q9NYY1 176 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 RPUSD1Q9UJJ7 312 aaKnown RBP11.42□□□□□ -0.58
PTPRE-203ENST00000442830 SOX21Q9Y651 276 aaPredicted RBP11.42□□□□□ -0.58
PTPRE-203ENST00000442830 COMMD3-BMI1R4GMX3 469 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 VWFP04275 2813 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 DVL1O14640 695 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 GPR137BO60478 399 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 LHBP01229 141 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 IFNGP01579 166 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 GYPAP02724 150 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 GRPP07492 148 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 EEF1B2P24534 225 aaKnown RBP11.41□□□□□ -0.58
PTPRE-203ENST00000442830 IER3P46695 156 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 HMGA2P52926 109 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 PRSS12P56730 875 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 TAF9Q16594 264 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 TIGD6Q17RP2 521 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 SLC35F1Q5T1Q4 408 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 PGBD2Q6P3X8 592 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 DPY19L4Q7Z388 723 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 FAM90A1Q86YD7 464 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 GCSAMQ8N6F7 178 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 DTX3Q8N9I9 347 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 C19orf18Q8NEA5 215 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 CSNK2A3Q8NEV1 391 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 OR2AE1Q8NHA4 323 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 ST8SIA4Q92187 359 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 ITFG2Q969R8 447 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 SLAMF6Q96DU3 332 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 MYLK2Q9H1R3 596 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 RGCCQ9H4X1 137 aa11.41□□□□□ -0.58
PTPRE-203ENST00000442830 PRPF19Q9UMS4 504 aaKnown RBP11.41□□□□□ -0.58
PTPRE-203ENST00000442830 ANXA2P2A6NMY6 339 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 SPARCP09486 303 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 HSD11B1P28845 292 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 PYCR1P32322 319 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 GNALP38405 381 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 SLC25A1P53007 311 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 ARF6P62330 175 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 RELBQ01201 579 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 IL5RAQ01344 420 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 C2orf68Q2NKX9 166 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 LRRC10Q5BKY1 277 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 DHRS7BQ6IAN0 325 aaPredicted RBP11.4□□□□□ -0.58
PTPRE-203ENST00000442830 RASSF6Q6ZTQ3 369 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 PGAM4Q8N0Y7 254 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 LNX2Q8N448 690 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 GALNT4Q8N4A0 578 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 OR5R1Q8NH85 324 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 DDOQ99489 341 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 C16orf95Q9H693 158 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 SMURF1Q9HCE7 757 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 TCF7L1Q9HCS4 588 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 CENPMQ9NSP4 180 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 TBC1D23Q9NUY8 699 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 PDP1Q9P0J1 537 aaPredicted RBP11.4□□□□□ -0.58
PTPRE-203ENST00000442830 ZNF391Q9UJN7 358 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 V9GYQ6 96 aa11.4□□□□□ -0.58
PTPRE-203ENST00000442830 NKX6-3A6NJ46 265 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 SLC22A31A6NKX4 558 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 TMEM210A6NLX4 147 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 ARPC2O15144 300 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 TBX1O43435 398 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 NDUFB3O43676 98 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 ZNF3P17036 446 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 TGFBR2P37173 567 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 PRKXP51817 358 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 PROK1P58294 105 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 GK3PQ14409 553 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 NCR3LG1Q68D85 454 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 C11orf88Q6PI97 169 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 C16orf89Q6UX73 402 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 C1orf122Q6ZSJ8 110 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 SHFQ7M4L6 423 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 VMO1Q7Z5L0 202 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 ZSCAN4Q8NAM6 433 aaPredicted RBP11.39□□□□□ -0.59
PTPRE-203ENST00000442830 SLC37A3Q8NCC5 494 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 LY6G5BQ8NDX9 201 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 OR2T33Q8NG76 320 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 OR10Z1Q8NGY1 313 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 LINC01006Q8NI28 216 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 LRRC29Q8WV35 223 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 MICU1Q9BPX6 476 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 RBM4BQ9BQ04 359 aaKnown RBP11.39□□□□□ -0.59
PTPRE-203ENST00000442830 OR10A2Q9H208 303 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 EGLN3Q9H6Z9 239 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 ONECUT1Q9UBC0 465 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 VPREB3Q9UKI3 123 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 LYVE1Q9Y5Y7 322 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 CMYA5Q8N3K9 4069 aa11.39□□□□□ -0.59
PTPRE-203ENST00000442830 A0A0U1RQK1 487 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 TVP23AA6NH52 213 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 RIIAD1A6NNX1 92 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 TNFRSF11BO00300 401 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 ZNF593O00488 134 aaPredicted RBP11.38□□□□□ -0.59
PTPRE-203ENST00000442830 CCNB2O95067 398 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 PAHP00439 452 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 ANXA2P07355 339 aaKnown RBP11.38□□□□□ -0.59
PTPRE-203ENST00000442830 CX3CR1P49238 355 aa11.38□□□□□ -0.59
PTPRE-203ENST00000442830 FAM3AP98173 230 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms