RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 HACD4Q5VWC8 232 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF57Q68EA5 555 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 PYHIN1Q6K0P9 492 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 SFXN4Q6P4A7 337 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 PLET1Q6UQ28 207 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 C5orf46Q6UWT4 87 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 BAIAP2L2Q6UXY1 529 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TMEM182Q6ZP80 229 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 NCCRP1Q6ZVX7 275 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM122BQ7Z309 247 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM220AQ7Z4H9 259 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 CDC20BQ86Y33 519 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 MISPQ8IVT2 679 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM219AQ8IW50 185 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 C9orf40Q8IXQ3 194 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 PRSS58Q8IYP2 241 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 UBE2J2Q8N2K1 259 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 MUC20Q8N307 709 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 YIPF7Q8N8F6 280 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 SAMD12Q8N8I0 201 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF441Q8N8Z8 693 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 DUSP18Q8NEJ0 188 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 C17orf47Q8NEP4 570 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 CSNK2A3Q8NEV1 391 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR2AK2Q8NG84 335 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR4M1Q8NGD0 313 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR13C5Q8NGS8 318 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR6K6Q8NGW6 343 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR2T4Q8NH00 348 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR6S1Q8NH40 331 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRMT10AQ8TBZ6 339 aaKnown RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZPLD1Q8TCW7 415 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 GPR119Q8TDV5 335 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TMEM234Q8WY98 164 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TAAR8Q969N4 342 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ST6GALNAC6Q969X2 333 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 RFT1Q96AA3 541 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 RASD2Q96D21 266 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 SMIM19Q96E16 107 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 OMA1Q96E52 524 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 PELI1Q96FA3 418 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF486Q96H40 463 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 PGLYRP3Q96LB9 341 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 DUX3Q96PT4 197 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TSPAN32Q96QS1 320 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 LPAR4Q99677 370 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TTTY10Q9BZA0 68 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 VN1R1Q9GZP7 353 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLITRK2Q9H156 845 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 PRO3102Q9H379 93 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 RNF121Q9H920 327 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 FKRPQ9H9S5 495 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 NEK6Q9HC98 313 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 B3GAT2Q9NPZ5 323 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 RPRD1BQ9NQG5 326 aaKnown RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 INIPQ9NRY2 104 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 FGF21Q9NSA1 209 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 RBFOX1Q9NWB1 397 aaKnown RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TAS2R5Q9NYW4 299 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 AKAP7Q9P0M2 348 aaPredicted RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 TINAGQ9UJW2 476 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 POU2F3Q9UKI9 436 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 COPS3Q9UNS2 423 aa3□□□□□ -1.93
HMGB3P11-201ENST00000440127 AK6Q9Y3D8 172 aaKnown RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 PRRC2BQ5JSZ5 2229 aaKnown RBP3□□□□□ -1.93
HMGB3P11-201ENST00000440127 IGLV3-12A0A075B6K2 115 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 TMED7-TICAM2A0A0A6YYA0 188 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ARPC4-TTLL3A0A0A6YYG9 625 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A0G2JMP0 313 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A0X1KG70 313 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A1B0GTQ1 180 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 TMEM72A0PK05 275 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ANKUB1A6NFN9 424 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 TVP23AA6NH52 213 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR6C70A6NIJ9 312 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 CENPBD1B2RD01 187 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM90A26D6RGX4 464 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 INMT-MINDY4F8WBC2 141 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 J3QR06 171 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 XKRYO14609 159 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 TIMM23O14925 209 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ST8SIA3O43173 380 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ARHGEF9O43307 516 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 EEF1E1O43324 174 aaKnown RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 SULT1B1O43704 296 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 SCO2O43819 266 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR2T1O43869 369 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ORC5O43913 435 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 GMFGO60234 142 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ALOX12BO75342 701 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 ATP6V1G1O75348 118 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 UPK3AO75631 287 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 RPP14O95059 124 aaKnown RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 UBL3O95164 117 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR6A2O95222 327 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 AHSA1O95433 338 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 DHFRP00374 187 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 PLGP00747 810 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 RAF1P04049 648 aa2.99□□□□□ -1.93
HMGB3P11-201ENST00000440127 HEXBP07686 556 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms