RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 NRIP2Q9BQI9 281 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 TLNRD1Q9H1K6 362 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 MFNGO00587 321 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 TBXA2RP21731 343 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 RPL27P61353 136 aaKnown RBP13.24□□□□□ -0.29
PCNX1-202ENST00000439984 NTHL1P78549 312 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 RPL24P83731 157 aaKnown RBP13.24□□□□□ -0.29
PCNX1-202ENST00000439984 RAB35Q15286 201 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 OR4A16Q8NH70 328 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 MARVELD3Q96A59 401 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 RAB18Q9NP72 206 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 HEYLQ9NQ87 328 aaPredicted RBP13.24□□□□□ -0.29
PCNX1-202ENST00000439984 PPP1R3CQ9UQK1 317 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 DMRT1Q9Y5R6 373 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 ADAMTS4O75173 837 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 RAE1P78406 368 aaKnown RBP13.24□□□□□ -0.29
PCNX1-202ENST00000439984 HFEQ30201 348 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 FAM78BQ5VT40 261 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 ZNF880Q6PDB4 577 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 MYEOVQ96EZ4 313 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 APOOQ9BUR5 198 aa13.24□□□□□ -0.29
PCNX1-202ENST00000439984 FTCDNL1E5RQL4 147 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 PRKNO60260 465 aaPredicted RBP13.23□□□□□ -0.29
PCNX1-202ENST00000439984 SFT2D2O95562 160 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 OR8U8P0C7N1 319 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 CATR1Q13166 79 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 ABLIM2Q6H8Q1 611 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 TCTEX1D1Q8N7M0 179 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 ATG101Q9BSB4 218 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 TMPRSS13Q9BYE2 586 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 BCL2L10Q9HD36 194 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 C20orf141Q9NUB4 165 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 FUT9Q9Y231 359 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 EGR3Q06889 387 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 SURF2Q15527 256 aaPredicted RBP13.23□□□□□ -0.29
PCNX1-202ENST00000439984 TMEM241Q24JQ0 296 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 NOL4LQ96MY1 436 aaPredicted RBP13.23□□□□□ -0.29
PCNX1-202ENST00000439984 GGACTQ9BVM4 153 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 MYO9BQ13459 2157 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 KLK3P07288 261 aaPredicted RBP13.23□□□□□ -0.29
PCNX1-202ENST00000439984 PRPH2P23942 346 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 GRB2P62993 217 aaKnown RBP13.23□□□□□ -0.29
PCNX1-202ENST00000439984 RPL18Q07020 188 aaKnown RBP13.23□□□□□ -0.29
PCNX1-202ENST00000439984 DUSP8Q13202 625 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 C11orf42Q8N5U0 333 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 HCFC1R1Q9NWW0 138 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 POMT1Q9Y6A1 747 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 TMEM267Q0VDI3 215 aaPredicted RBP13.23□□□□□ -0.29
PCNX1-202ENST00000439984 OR52N4Q8NGI2 321 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 OR5L2Q8NGL0 311 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 VN1R1Q9GZP7 353 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 PSENENQ9NZ42 101 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 TGM5O43548 720 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.23□□□□□ -0.292e-12■■■■■ 34.3
PCNX1-202ENST00000439984 C12orf76Q8N812 135 aaPredicted RBP13.23□□□□□ -0.29
PCNX1-202ENST00000439984 KDF1Q8NAX2 398 aaPredicted RBP13.23□□□□□ -0.29
PCNX1-202ENST00000439984 UBE2L5PA0A1B0GUS4 154 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 EMDP50402 254 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 ETV3LQ6ZN32 361 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 MYOTQ9UBF9 498 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 SH3BGRL2Q9UJC5 107 aa13.23□□□□□ -0.29
PCNX1-202ENST00000439984 FAM24AA6NFZ4 105 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 A8MVM7 634 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 H3BQ15 152 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 RPS16P62249 146 aaKnown RBP13.22□□□□□ -0.29
PCNX1-202ENST00000439984 PRTGQ2VWP7 1150 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 LBHQ53QV2 105 aaPredicted RBP13.22□□□□□ -0.29
PCNX1-202ENST00000439984 ATRAIDQ6UW56 229 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 C22orf15Q8WYQ4 148 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 METTL12A8MUP2 240 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 EFSO43281 561 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 RCC1P18754 421 aaPredicted RBP13.22□□□□□ -0.29
PCNX1-202ENST00000439984 HMGA2P52926 109 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 MS4A6EQ96DS6 147 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 K7ESM1 405 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 DUS4LO95620 317 aaKnown RBP13.22□□□□□ -0.29
PCNX1-202ENST00000439984 ACER2Q5QJU3 275 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 SLAMF6Q96DU3 332 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 FAM122AQ96E09 287 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 ZNF552Q9H707 407 aaPredicted RBP13.22□□□□□ -0.29
PCNX1-202ENST00000439984 APOBEC3BQ9UH17 382 aaKnown RBP13.22□□□□□ -0.29
PCNX1-202ENST00000439984 OR5K4A6NMS3 321 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 CRHP06850 196 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 DTYMKP23919 212 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 CLN3Q13286 438 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 MOB1BQ7L9L4 216 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 MR1Q95460 341 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 ATP5SQ99766 215 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 SBF2Q86WG5 1849 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 C1QCP02747 245 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 SLC25A6P12236 298 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 NHLRC3Q5JS37 347 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 OR5C1Q8NGR4 320 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 VN1R17PQ8TDU5 208 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 HIPK2Q9H2X6 1198 aa13.22□□□□□ -0.29
PCNX1-202ENST00000439984 HS3ST1O14792 307 aa13.21□□□□□ -0.29
PCNX1-202ENST00000439984 CCKARP32238 428 aa13.21□□□□□ -0.29
PCNX1-202ENST00000439984 BSGP35613 385 aa13.21□□□□□ -0.29
PCNX1-202ENST00000439984 ERVFC1-1P60608 527 aa13.21□□□□□ -0.29
PCNX1-202ENST00000439984 TMEM176BQ3YBM2 270 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms