RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 PDP1Q9P0J1 537 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 ZNF319Q9P2F9 582 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 IGHV3OR16-10A0A075B7F0 116 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 ANKRD30BLA7E2S9 258 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 C3orf80F5H4A9 247 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 LHBP01229 141 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 ANXA2P07355 339 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 HKR1P10072 659 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 PAICSP22234 425 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 POU1F1P28069 291 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 NPY4RP50391 375 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 ZNF121P58317 390 aaPredicted RBP16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 MZT1Q08AG7 82 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 BAMBIQ13145 260 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 KLHL12Q53G59 568 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 FAM57BQ71RH2 274 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 REEP6Q96HR9 211 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 DUX5Q96PT3 197 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 OR51V1Q9H2C8 321 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 MMADHCQ9H3L0 296 aaPredicted RBP16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 TRIM36Q9NQ86 728 aa16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 SOX21Q9Y651 276 aaPredicted RBP16.88■□□□□ 0.29
NCKIPSD-206ENST00000439518 TRAV38-1A0A0B4J264 116 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 TRAV40A0A0B4J280 105 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 hCG_38984A0A1B0GV85 526 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 OOEPA6NGQ2 149 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 CLDN34H7C241 214 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 GNGT2O14610 69 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 NDUFA2O43678 99 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 ENSAO43768 121 aaKnown RBP16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 OSMP13725 252 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 MTNR1AP48039 350 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 FGF12P61328 243 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 CDK5Q00535 292 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 OR8B8Q15620 311 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 TIGD6Q17RP2 521 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 PLBD1Q6P4A8 553 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 TRPM8Q7Z2W7 1104 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 WDR86Q86TI4 376 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 C11orf53Q8IXP5 236 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 HS3ST5Q8IZT8 346 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 OTOSQ8NHW6 89 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 ZMYND19Q96E35 227 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 TECTBQ96PL2 329 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 SMURF1Q9HCE7 757 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 DNAJC27Q9NZQ0 273 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 ERVK-18Q9QC07 812 aa16.87■□□□□ 0.29
NCKIPSD-206ENST00000439518 A6NLC8 198 aa16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 PRR23D1E9PI22 279 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 ADAM20O43506 726 aa16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 HMGN1P05114 100 aa16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 RNASE1P07998 156 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 PRR23D2P0DMB1 279 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 CFL1P23528 166 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 GSK3AP49840 483 aa16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 TEX36Q5VZQ5 186 aa16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 CD276Q5ZPR3 534 aa16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 FAM90A1Q86YD7 464 aa16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 OR8S1Q8NH09 359 aa16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 RNPEPL1Q9HAU8 725 aa16.86■□□□□ 0.29
NCKIPSD-206ENST00000439518 PKD1L1Q8TDX9 2849 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 DYNC1I1O14576 645 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 PRODHO43272 600 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 SELENOFO60613 162 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 E2F6O75461 281 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 FCN3O75636 299 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 H2BFMP0C1H6 154 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 PRKACGP22612 351 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 FOXL1Q12952 345 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 SLC9A3R2Q15599 337 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 CPOQ8IVL8 374 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 ZNF454Q8N9F8 522 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 PAPD5Q8NDF8 572 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 SLC7A6OSQ96CW6 309 aaPredicted RBP16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 OR10A2Q9H208 303 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 PRDM13Q9H4Q3 707 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 RGCCQ9H4X1 137 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 PPP1R3EQ9H7J1 279 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 ZNF556Q9HAH1 456 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 BRD7Q9NPI1 651 aa16.85■□□□□ 0.29
NCKIPSD-206ENST00000439518 hCG_1807616A0A1W2PRN6 198 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 TCRBV3S1A0A5B6 114 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 GYG2O15488 501 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 GYPAP02724 150 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 LIPFP07098 398 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 LYNP07948 512 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 ANXA8P13928 327 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 MMP9P14780 707 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 EGR1P18146 543 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 FLOT2Q14254 428 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 DNAL1Q4LDG9 190 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 SPATA24Q86W54 205 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 CSNK2A3Q8NEV1 391 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 OR1M1Q8NGA1 313 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 SLC25A28Q96A46 364 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 PGAM5Q96HS1 289 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 RASSF4Q9H2L5 321 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 KAAG1Q9UBP8 84 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 DNAJB9Q9UBS3 223 aa16.84■□□□□ 0.29
NCKIPSD-206ENST00000439518 KLHDC2Q9Y2U9 406 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms