RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 U3KQ87 197 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 KIAA1671Q9BY89 1806 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 CDK2AP1O14519 115 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 GDF9O60383 454 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 DIRAS3O95661 229 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 GCH1P30793 250 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 RBM39Q14498 530 aaKnown RBP10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 C2orf76Q3KRA6 126 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 EIF5AL1Q6IS14 154 aaKnown RBP10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 IDO2Q6ZQW0 420 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 TRILQ7L0X0 811 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 MRGPREQ86SM8 312 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 MCHR2Q969V1 340 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 C20orf24Q9BUV8 137 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 CYSLTR2Q9NS75 346 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 LNP1A1A4G5 178 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 ASAH2BP0C7U1 165 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 ADH6P28332 368 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 DCTDP32321 178 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 PPT1P50897 306 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 CFHR1Q03591 330 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 SHBQ15464 509 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 STEAP1BQ6NZ63 245 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 FAM122CQ6P4D5 195 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 GALNT16Q8N428 558 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 SEMA6DQ8NFY4 1073 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 OR51S1Q8NGJ8 323 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 OR10D3Q8NH80 312 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 AKR7LQ8NHP1 331 aa10.32□□□□□ -0.76
TRAPPC9-202ENST00000438773 IGKV3D-11A0A0A0MRZ8 115 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 CLN3Q13286 438 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 RBMS2Q15434 407 aaKnown RBP10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 ABHD1Q96SE0 405 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 ADAM19Q9H013 955 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 ZCCHC4Q9H5U6 513 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 B3GNT2Q9NY97 397 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 ZNF44P15621 663 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 SLC6A1P30531 599 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 EFNB1P98172 346 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 CSRP2Q16527 193 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 NLRC3Q7RTR2 1065 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 MS4A7Q9GZW8 240 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 BIN3Q9NQY0 253 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 POLEQ07864 2286 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 C21orf140B9A014 251 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 MASP2O00187 686 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 CPT2P23786 658 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 AKR1C3P42330 323 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 RAB5BP61020 215 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 VAMP2P63027 116 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 JMJD6Q6NYC1 403 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 CD200R1LQ6Q8B3 271 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 ZNF611Q8N823 705 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 ZNF485Q8NCK3 441 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 FOXB1Q99853 325 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 ARPC5LQ9BPX5 153 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 SLC5A7Q9GZV3 580 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 PRMT8Q9NR22 394 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 GPR173Q9NS66 373 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 GLS2Q9UI32 602 aa10.31□□□□□ -0.76
TRAPPC9-202ENST00000438773 TMEM235A6NFC5 223 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 NPIPB9F8W1W9 429 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 TRAPPC2LH3BP13 241 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 NME2P22392 152 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 S100A11P31949 105 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 BTCP35070 178 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 RAP2BP61225 183 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 APCDD1LQ8NCL9 501 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 OR9K2Q8NGE7 335 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 OR52H1Q8NGJ2 320 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 NINJ1Q92982 152 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 CMSS1Q9BQ75 279 aaKnown RBP10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 SNRNP200O75643 2136 aaKnown RBP10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 DCTN6O00399 190 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 OGG1O15527 345 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 CFDP00746 253 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 PI3P19957 117 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 GNRHRP30968 328 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 HOXA6P31267 233 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 RAC3P60763 192 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 PLPPR5Q32ZL2 321 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 ZNF529Q6P280 563 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 DEGS2Q6QHC5 323 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 ASB10Q8WXI3 467 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 ZNF416Q9BWM5 594 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 EHFQ9NZC4 300 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 TRGV5A0A0B4J1U4 118 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 LINC01387J3KSC0 135 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 EFNA3P52797 238 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 SEC61A1P61619 476 aaKnown RBP10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 PLA1AQ53H76 456 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 ELFN2Q5R3F8 820 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 OR4K15Q8NH41 348 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 SLAMF9Q96A28 289 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 PHB2Q99623 299 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 MFRPQ9BY79 579 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 RALGAPA1Q6GYQ0 2036 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 TICRRQ7Z2Z1 1910 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 OR6C65A6NJZ3 312 aa10.3□□□□□ -0.76
TRAPPC9-202ENST00000438773 C1orf196B1AJZ1 125 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms