RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PTBP3O95758 552 aaKnown RBP20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 GSK3AP49840 483 aa20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 HCCSP53701 268 aa20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 PRAMEF6Q5VXH4 476 aa20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 BCDIN3DQ7Z5W3 292 aaKnown RBP20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 OR8S1Q8NH09 359 aa20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 UFSP2Q9NUQ7 469 aa20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 HAO2Q9NYQ3 351 aa20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 ZNF319Q9P2F9 582 aa20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 ATRQ13535 2644 aa20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 PPIAL4EA0A075B759 164 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 PPIAL4DF5H284 164 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 J3QLI3 93 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 PPIAL4FP0DN26 164 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 DCTDP32321 178 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 POLR2IP36954 125 aaKnown RBP20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 RBMXP38159 391 aaKnown RBP20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 PMELP40967 661 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 CDC42P60953 191 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 ROM1Q03395 351 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 DCAF12L2Q5VW00 463 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 ZNF679Q8IYX0 411 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 OR8J1Q8NGP2 316 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 OR8B4Q96RC9 309 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 USE1Q9NZ43 259 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 PPIAL4AQ9Y536 164 aa20.77■□□□□ 0.92
RAPGEF1-206ENST00000438647 PPIAL4CA0A0B4J2A2 164 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 CEACAM18A8MTB9 384 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 F5H0A9 414 aaPredicted RBP20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 FAM20BO75063 409 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 ALPLP05186 524 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 GNALP38405 381 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 RIDAP52758 137 aaKnown RBP20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 LCN2P80188 198 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 SCGB2A2Q13296 93 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 OR8B8Q15620 311 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 MPPED2Q15777 294 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 ESCO2Q56NI9 601 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 SLC35F2Q8IXU6 374 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 DVL3Q92997 716 aaPredicted RBP20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 TMEM165Q9HC07 324 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 RNF7Q9UBF6 113 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 MIOXQ9UGB7 285 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 WARS2Q9UGM6 360 aaKnown RBP20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 IKZF2Q9UKS7 526 aa20.76■□□□□ 0.91
RAPGEF1-206ENST00000438647 TMEM269A0A1B0GVZ9 245 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 EI24O14681 340 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 ZNF205O95201 554 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 ALDH3A2P51648 485 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 POU4F2Q12837 409 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 ZNF829Q3KNS6 432 aaPredicted RBP20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 OR8B12Q8NGG6 310 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 ITFG2Q969R8 447 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 PAPOLGQ9BWT3 736 aaKnown RBP20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 ADGRL4Q9HBW9 690 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 ABCB9Q9NP78 766 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 CLN6Q9NWW5 311 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 COPS3Q9UNS2 423 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 LRCH1Q9Y2L9 728 aa20.75■□□□□ 0.91
RAPGEF1-206ENST00000438647 A6NLC8 198 aa20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 ZNF670-ZNF695F2Z2N8 137 aa20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 PSMD9O00233 223 aa20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 RPS2P15880 293 aaKnown RBP20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 CXCR4P61073 352 aa20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 KCNJ8Q15842 424 aa20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 ZNF404Q494X3 552 aa20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 ZNF322Q6U7Q0 402 aaPredicted RBP20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 NLRC3Q7RTR2 1065 aa20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 RFKQ969G6 155 aa20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 IMPAD1Q9NX62 359 aa20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 POLR3KQ9Y2Y1 108 aaPredicted RBP20.74■□□□□ 0.91
RAPGEF1-206ENST00000438647 WNK2Q9Y3S1 2297 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 A0A0U1RQV5 110 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 ANXA2P2A6NMY6 339 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 A8MXK9 166 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 GRPP07492 148 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 HTR1FP30939 366 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 IL5RAQ01344 420 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 EGR3Q06889 387 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 TMED1Q13445 227 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 OR51G2Q8NGK0 314 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 TRUB1Q8WWH5 349 aaKnown RBP20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 TMEM246Q9BRR3 403 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 C9orf16Q9BUW7 83 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 S100A14Q9HCY8 104 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 TRIM36Q9NQ86 728 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 FAM206AQ9NX38 181 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 MPC1Q9Y5U8 109 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 MXRA5Q9NR99 2828 aa20.73■□□□□ 0.91
RAPGEF1-206ENST00000438647 WNT2P09544 360 aa20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 ZFP36P26651 326 aaKnown RBP20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 FAM201AQ5SY85 155 aa20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 DCDC5Q6ZRR9 648 aa20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 FAM81AQ8TBF8 368 aa20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 NEIL1Q96FI4 390 aaPredicted RBP20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 MICU1Q9BPX6 476 aa20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 TMPRSS13Q9BYE2 586 aa20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 TTTY10Q9BZA0 68 aa20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 MOB1AQ9H8S9 216 aa20.72■□□□□ 0.91
RAPGEF1-206ENST00000438647 C1orf123Q9NWV4 160 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms