RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TNFSF14O43557 240 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 KCNJ3P48549 501 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 GPM6AP51674 278 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 SLC16A11Q8NCK7 471 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 FGF22Q9HCT0 170 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 TRIP11Q15643 1979 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 TUBAL3A6NHL2 446 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 LILRA5A6NI73 299 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 M0R1X1 148 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 ABLIM3O94929 683 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 MDH2P40926 338 aaKnown RBP10.13□□□□□ -0.79
SCN4A-201ENST00000435607 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
SCN4A-201ENST00000435607 OTUD1Q5VV17 481 aaPredicted RBP10.13□□□□□ -0.79
SCN4A-201ENST00000435607 FAM122BQ7Z309 247 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 PFN4Q8NHR9 129 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 CLDN23Q96B33 292 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 FAM103A1Q9BTL3 118 aaKnown RBP10.13□□□□□ -0.79
SCN4A-201ENST00000435607 OR6C3Q9NZP0 311 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 R4GMQ9 66 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 A0A087WV62 115 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 TRDV1A0A1B0GX56 115 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 KRASP01116 189 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 B4GALT1P15291 398 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 SLC35B1P78383 322 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 ACKR1Q16570 336 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 CLEC2AQ6UVW9 174 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 MS4A7Q9GZW8 240 aaPredicted RBP10.13□□□□□ -0.79
SCN4A-201ENST00000435607 GNG10P50151 68 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 CCR9P51686 369 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 FDX2Q6P4F2 183 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 LCN15Q6UWW0 184 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 ANKRD33Q7Z3H0 272 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 DIRC2Q96SL1 478 aa10.13□□□□□ -0.79
SCN4A-201ENST00000435607 SLC25A5P05141 298 aaKnown RBP10.12□□□□□ -0.79
SCN4A-201ENST00000435607 COX7A1P24310 79 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 LSM11P83369 360 aaKnown RBP eCLIP10.12□□□□□ -0.79
SCN4A-201ENST00000435607 ZNF485Q8NCK3 441 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 OR4C3Q8NH37 302 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 SLC39A13Q96H72 371 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 MIEN1Q9BRT3 115 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 ANKUB1A6NFN9 424 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 K7ESF4 209 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 PSMB2P49721 201 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 SPCS3P61009 180 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 DUSP8Q13202 625 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 C1QTNF3Q9BXJ4 246 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 RBFOX1Q9NWB1 397 aaKnown RBP10.12□□□□□ -0.79
SCN4A-201ENST00000435607 PRSS37A4D1T9 235 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 SULT1A3P0DMM9 295 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 SULT1A4P0DMN0 295 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 PTBP1P26599 531 aaKnown RBP eCLIP10.12□□□□□ -0.79
SCN4A-201ENST00000435607 LYG1Q8N1E2 194 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 VPS25Q9BRG1 176 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 CHST6Q9GZX3 395 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 HEXA-AS1Q9H8Q6 139 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 WNT16Q9UBV4 365 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 STAG3L2P0CL84 134 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 CD1EP15812 388 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 CBR1P16152 277 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 ACP1P24666 158 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 OPRM1P35372 400 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 PPP1CCP36873 323 aaKnown RBP10.12□□□□□ -0.79
SCN4A-201ENST00000435607 DHRS4L2Q6PKH6 230 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 OR52N4Q8NGI2 321 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 SDF2Q99470 211 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 COL16A1Q07092 1604 aaPredicted RBP10.12□□□□□ -0.79
SCN4A-201ENST00000435607 SERPINE3A8MV23 424 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 C2CD4DB7Z1M9 353 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 CD82P27701 267 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 OR2B8PP59922 312 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 HAGHQ16775 308 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 SPATA46Q5T0L3 261 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 CYHR1Q6ZMK1 362 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 SIAH3Q8IW03 269 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 VSTM2AQ8TAG5 236 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 MS4A6EQ96DS6 147 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 MS4A4AQ96JQ5 239 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 CSAG2Q9Y5P2 127 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 DLG5Q8TDM6 1919 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 KRBA1A5PL33 1030 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 TCRBP04435 133 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 SPI1P17947 270 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 MPGP29372 298 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 PIGAP37287 484 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
SCN4A-201ENST00000435607 CORO6Q6QEF8 472 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 ZNF384Q8TF68 577 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 BCL7CQ8WUZ0 217 aaPredicted RBP10.12□□□□□ -0.79
SCN4A-201ENST00000435607 PP6455Q8WZ26 134 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 RPUSD4Q96CM3 377 aaKnown RBP10.12□□□□□ -0.79
SCN4A-201ENST00000435607 MRGPRX3Q96LB0 322 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 PKMYT1Q99640 499 aa10.12□□□□□ -0.79
SCN4A-201ENST00000435607 MKRN2Q9H000 416 aaKnown RBP10.12□□□□□ -0.79
SCN4A-201ENST00000435607 NUPL2O15504 423 aaKnown RBP10.11□□□□□ -0.79
SCN4A-201ENST00000435607 DHHO43323 396 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 APEHP13798 732 aaKnown RBP10.11□□□□□ -0.79
SCN4A-201ENST00000435607 PRF1P14222 555 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 FAM3AP98173 230 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 TM4SF19Q96DZ7 209 aa10.11□□□□□ -0.79
SCN4A-201ENST00000435607 SMIM7Q9BQ49 75 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms