RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 CLN6Q9NWW5 311 aa13.69□□□□□ -0.22
SMPD4-207ENST00000435455 UBAP1Q9NZ09 502 aa13.69□□□□□ -0.22
SMPD4-207ENST00000435455 IGHV3-64DA0A0J9YX35 117 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 ZNF670-ZNF695F2Z2N8 137 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 IRF2P14316 349 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 SRD5A1P18405 259 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 HTR1FP30939 366 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 RIDAP52758 137 aaKnown RBP13.68□□□□□ -0.22
SMPD4-207ENST00000435455 TMED1Q13445 227 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 ZNF829Q3KNS6 432 aaPredicted RBP13.68□□□□□ -0.22
SMPD4-207ENST00000435455 ZNF420Q8TAQ5 688 aaPredicted RBP13.68□□□□□ -0.22
SMPD4-207ENST00000435455 FAM81AQ8TBF8 368 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 TRUB1Q8WWH5 349 aaKnown RBP13.68□□□□□ -0.22
SMPD4-207ENST00000435455 ITFG2Q969R8 447 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 HRASLS5Q96KN8 279 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 OR8B4Q96RC9 309 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 FN3KRPQ9HA64 309 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 ZNF319Q9P2F9 582 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 IKZF2Q9UKS7 526 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 COPS3Q9UNS2 423 aa13.68□□□□□ -0.22
SMPD4-207ENST00000435455 A0A0U1RQV5 110 aa13.67□□□□□ -0.22
SMPD4-207ENST00000435455 TMEM269A0A1B0GVZ9 245 aa13.67□□□□□ -0.22
SMPD4-207ENST00000435455 PLPP2O43688 288 aa13.67□□□□□ -0.22
SMPD4-207ENST00000435455 FSTL3O95633 263 aa13.67□□□□□ -0.22
SMPD4-207ENST00000435455 PTBP3O95758 552 aaKnown RBP13.67□□□□□ -0.22
SMPD4-207ENST00000435455 CYB5R3P00387 301 aaPredicted RBP13.67□□□□□ -0.22
SMPD4-207ENST00000435455 CPT2P23786 658 aa13.67□□□□□ -0.22
SMPD4-207ENST00000435455 GNALP38405 381 aa13.67□□□□□ -0.22
SMPD4-207ENST00000435455 CXCR4P61073 352 aa13.67□□□□□ -0.22
SMPD4-207ENST00000435455 HNRNPA0Q13151 305 aaKnown RBP13.67□□□□□ -0.22
SMPD4-207ENST00000435455 OR8B8Q15620 311 aa13.67□□□□□ -0.22
SMPD4-207ENST00000435455 ZNF322Q6U7Q0 402 aaPredicted RBP13.67□□□□□ -0.22
SMPD4-207ENST00000435455 OR8B12Q8NGG6 310 aa13.67□□□□□ -0.22
SMPD4-207ENST00000435455 OR51G2Q8NGK0 314 aa13.67□□□□□ -0.22
SMPD4-207ENST00000435455 PATZ1Q9HBE1 687 aaKnown RBP13.67□□□□□ -0.22
SMPD4-207ENST00000435455 UFSP2Q9NUQ7 469 aa13.67□□□□□ -0.22
SMPD4-207ENST00000435455 PSMD9O00233 223 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 FAM20BO75063 409 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 ATP6V1E1P36543 226 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 PMELP40967 661 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 ZIK1Q3SY52 487 aaPredicted RBP13.66□□□□□ -0.22
SMPD4-207ENST00000435455 PRAMEF6Q5VXH4 476 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 ZBTB49Q6ZSB9 765 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 IL17RELQ6ZVW7 336 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 ZNF771Q7L3S4 317 aaPredicted RBP13.66□□□□□ -0.22
SMPD4-207ENST00000435455 OR8S1Q8NH09 359 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 EME1Q96AY2 570 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 PAPOLGQ9BWT3 736 aaKnown RBP13.66□□□□□ -0.22
SMPD4-207ENST00000435455 ABCB9Q9NP78 766 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 FAM206AQ9NX38 181 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 RNF7Q9UBF6 113 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 MPC1Q9Y5U8 109 aa13.66□□□□□ -0.22
SMPD4-207ENST00000435455 DOCK11Q5JSL3 2073 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 PPIAL4EA0A075B759 164 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 A0A0G2JMP0 313 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 A0A0X1KG70 313 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 PRR32B1ATL7 298 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 E9PQ18 207 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 F5H0A9 414 aaPredicted RBP13.65□□□□□ -0.22
SMPD4-207ENST00000435455 PPIAL4DF5H284 164 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 FOXH1O75593 365 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 BAG2O95816 211 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 OR2T7P0C7T2 308 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 PPIAL4FP0DN26 164 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 ATP6V1B1P15313 513 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 GATA3P23771 443 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 RBMXP38159 391 aaKnown RBP13.65□□□□□ -0.22
SMPD4-207ENST00000435455 MAP2K3P46734 347 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 SNRPGP62308 76 aaKnown RBP13.65□□□□□ -0.22
SMPD4-207ENST00000435455 EGR3Q06889 387 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 MPPED2Q15777 294 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 ZSCAN26Q16670 478 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 SLC25A30Q5SVS4 291 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 RFLNBQ8N5W9 214 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 OR4M2Q8NGB6 313 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 OR2T27Q8NH04 317 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 DVL3Q92997 716 aaPredicted RBP13.65□□□□□ -0.22
SMPD4-207ENST00000435455 APOL4Q9BPW4 351 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 TTTY10Q9BZA0 68 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 PBOV1Q9GZY1 135 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 MOB1AQ9H8S9 216 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 TMEM165Q9HC07 324 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 MIOXQ9UGB7 285 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 NUFIP1Q9UHK0 495 aaKnown RBP13.65□□□□□ -0.22
SMPD4-207ENST00000435455 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.65□□□□□ -0.224e-7■■■□□ 17.3
SMPD4-207ENST00000435455 RHBDD3Q9Y3P4 386 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 PPIAL4AQ9Y536 164 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 ARHGAP32A7KAX9 2087 aa13.65□□□□□ -0.22
SMPD4-207ENST00000435455 SVEP1Q4LDE5 3571 aa13.65□□□□□ -0.23
SMPD4-207ENST00000435455 A6NLC8 198 aa13.64□□□□□ -0.23
SMPD4-207ENST00000435455 ANXA2P2A6NMY6 339 aa13.64□□□□□ -0.23
SMPD4-207ENST00000435455 CEACAM18A8MTB9 384 aa13.64□□□□□ -0.23
SMPD4-207ENST00000435455 PNPP00491 289 aa13.64□□□□□ -0.23
SMPD4-207ENST00000435455 GRPP07492 148 aa13.64□□□□□ -0.23
SMPD4-207ENST00000435455 ACKR3P25106 362 aa13.64□□□□□ -0.23
SMPD4-207ENST00000435455 SRP14P37108 136 aaKnown RBP13.64□□□□□ -0.23
SMPD4-207ENST00000435455 IL5RAQ01344 420 aa13.64□□□□□ -0.23
SMPD4-207ENST00000435455 ESCO2Q56NI9 601 aa13.64□□□□□ -0.23
SMPD4-207ENST00000435455 DCAF12L2Q5VW00 463 aa13.64□□□□□ -0.23
SMPD4-207ENST00000435455 MEDAGQ5VYS4 303 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms