RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 YIPF5Q969M3 257 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 SPSB4Q96A44 273 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 TIMD4Q96H15 378 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 SIGLEC11Q96RL6 698 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 ALG8Q9BVK2 526 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 NARFLQ9H6Q4 476 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 GPR84Q9NQS5 396 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 ACOXLQ9NUZ1 547 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 CHCHD3Q9NX63 227 aaKnown RBP13.18□□□□□ -0.3
TREX1-201ENST00000433541 MRPL15Q9P015 296 aaKnown RBP13.18□□□□□ -0.3
TREX1-201ENST00000433541 ZNF319Q9P2F9 582 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 IL19Q9UHD0 177 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 NUFIP1Q9UHK0 495 aaKnown RBP13.18□□□□□ -0.3
TREX1-201ENST00000433541 OR52A1Q9UKL2 312 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 PPP1R3CQ9UQK1 317 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 HIVEP1P15822 2718 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 ACANP16112 2415 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 ISPDA4D126 451 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 H0YJX3 145 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 MLNRO43193 412 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 GMDSO60547 372 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 MTRF1O75570 445 aaKnown RBP13.17□□□□□ -0.3
TREX1-201ENST00000433541 PNPP00491 289 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 CD55P08174 381 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 ADH4P08319 380 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 HTR1AP08908 422 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 MYL12AP19105 171 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 USF1P22415 310 aaPredicted RBP13.17□□□□□ -0.3
TREX1-201ENST00000433541 CRYBB2P43320 205 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 NR4A2P43354 598 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 MAP2K3P46734 347 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 ISL1P61371 349 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 MRPS11P82912 194 aaKnown RBP13.17□□□□□ -0.3
TREX1-201ENST00000433541 MZT1Q08AG7 82 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 DNM1P46Q6ZS02 220 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 KCTD20Q7Z5Y7 419 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 OR52I1Q8NGK6 324 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 TFAP2CQ92754 450 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 C4orf36Q96KX1 117 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 TMUB1Q9BVT8 246 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 INPP5EQ9NRR6 644 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 MYRFQ9Y2G1 1151 aa13.17□□□□□ -0.3
TREX1-201ENST00000433541 A0A0U1RQV5 110 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 A0A1B0GVI7 797 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 A6NLC8 198 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 ANXA2P2A6NMY6 339 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 H3BSH0 61 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 P2RY10O00398 339 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 RRP9O43818 475 aaKnown RBP13.16□□□□□ -0.3
TREX1-201ENST00000433541 VHLP40337 213 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 OR12D2P58182 307 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 MVKQ03426 396 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 SLC3A1Q07837 685 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 GALEQ14376 348 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 CDONQ4KMG0 1287 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 AVPI1Q5T686 147 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 BPIFB6Q8NFQ5 453 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 SEMA6DQ8NFY4 1073 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 PIGCQ92535 297 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 PPP1R14AQ96A00 147 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 MEGF10Q96KG7 1140 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 COX4I2Q96KJ9 171 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 LYZL4Q96KX0 146 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 PLEKHA1Q9HB21 404 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 UFSP2Q9NUQ7 469 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 C14orf119Q9NWQ9 140 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 ERVK13-1Q9NX77 482 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 SLC22A13Q9Y226 551 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 CACNG2Q9Y698 323 aa13.16□□□□□ -0.3
TREX1-201ENST00000433541 VPS13CQ709C8 3753 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 TTRP02766 147 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 GRPP07492 148 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 IRF2P14316 349 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 FOSL1P15407 271 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 GIFP27352 417 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 TMEM33P57088 247 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 SPRNQ5BIV9 151 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 KCTD8Q6ZWB6 473 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 MOGAT3Q86VF5 341 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 ELMOD2Q8IZ81 293 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 STX19Q8N4C7 294 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 RORBQ92753 470 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 RAB1CQ92928 201 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 HIST1H2AAQ96QV6 131 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 PIGLQ9Y2B2 252 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 RHBDD3Q9Y3P4 386 aa13.15□□□□□ -0.3
TREX1-201ENST00000433541 hCG_1807616A0A1W2PRN6 198 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 EFCAB10A6NFE3 127 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 LRRC30A6NM36 301 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 ZNF850A8MQ14 1090 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 J3QRE1 110 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 XPNPEP2O43895 674 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 SRSF10O75494 262 aaKnown RBP13.14□□□□□ -0.31
TREX1-201ENST00000433541 IGHA1P01876 353 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 HEXAP06865 529 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 DCKP27707 260 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 CHN2P52757 468 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 GBX2P52951 348 aaPredicted RBP13.14□□□□□ -0.31
TREX1-201ENST00000433541 RIPPLY1Q0D2K3 151 aa13.14□□□□□ -0.31
TREX1-201ENST00000433541 PRDX4Q13162 271 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms