RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 OR52N5Q8NH56 324 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 BSCL2Q96G97 398 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 GPER1Q99527 375 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 RARRES2Q99969 163 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 TUBA4BQ9H853 241 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 HRASLS2Q9NWW9 162 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 SLC17A4Q9Y2C5 497 aa10.28□□□□□ -0.76
HMGCS1-202ENST00000433297 PRSS38A1L453 326 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 ZNF264O43296 627 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 SYT7O43581 403 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 WISP1O95388 367 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 NSA2O95478 260 aaKnown RBP10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 TXNDC12O95881 172 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 CXCL10P02778 98 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 H2BFMP0C1H6 154 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 CFPP27918 469 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 ZNF93P35789 620 aaPredicted RBP10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 RPS23P62266 143 aaKnown RBP10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 FMODQ06828 376 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 FDX2Q6P4F2 183 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 GLIPR1L1Q6UWM5 242 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 SPNS3Q6ZMD2 512 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 DTWD2Q8NBA8 298 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 POC1AQ8NBT0 407 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 APCDD1LQ8NCL9 501 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 ADAT3Q96EY9 351 aaPredicted RBP10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 RTBDNQ9BSG5 229 aaPredicted RBP10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 CHST5Q9GZS9 411 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 DNAJB11Q9UBS4 358 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 RCL1Q9Y2P8 373 aaKnown RBP10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 R4GMQ9 66 aa10.27□□□□□ -0.76
HMGCS1-202ENST00000433297 FANCMQ8IYD8 2048 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 XRCC2O43543 280 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 RAMP1O60894 148 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 DHPSP49366 369 aaPredicted RBP10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 SEC13P55735 322 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 SPEM2Q0P670 501 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 KIR2DS3Q14952 304 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 C1orf100Q5SVJ3 147 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 CYB5R2Q6BCY4 276 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 C12orf76Q8N812 135 aaPredicted RBP10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 SUMF2Q8NBJ7 301 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 OR5D18Q8NGL1 313 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 FAM213BQ8TBF2 198 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 C8orf44Q96CB5 159 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 ASB16Q96NS5 453 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 SH3BGRL3Q9H299 93 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 STARD10Q9Y365 291 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 POMT1Q9Y6A1 747 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 CNTRLQ7Z7A1 2325 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 A0A087X0M5 115 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 A0A1B0GX30 115 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 FABP4P15090 132 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 BCKDHBP21953 392 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 RGS19P49795 217 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 RBP2P50120 134 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 GLO1Q04760 184 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF239Q16600 458 aaKnown RBP10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 TMEM268Q5VZI3 342 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 SLC22A24Q8N4F4 322 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 NKAIN3Q8N8D7 197 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 OR14K1Q8NGZ2 314 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 OR1E3Q8WZA6 343 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 GAL3ST4Q96RP7 486 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 OR11A1Q9GZK7 315 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 SLC35B3Q9H1N7 401 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 LUZP4Q9P127 313 aa10.27□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF878C9JN71 531 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF217O75362 1048 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 CRTAPO75718 401 aaPredicted RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 DIRAS3O95661 229 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 SLC2A1P11166 492 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 RNH1P13489 461 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 TAGLN2P37802 199 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 RAB38P57729 211 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 RPL27P61353 136 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 PLAC9Q5JTB6 97 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 CNKSR3Q6P9H4 555 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 FNDC9Q8TBE3 224 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF775Q96BV0 537 aaPredicted RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 ARHGAP5-AS1Q96IT6 56 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 LURAP1Q96LR2 239 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 PRRX2Q99811 253 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 C19orf12Q9NSK7 152 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 PPP4R1LQ9P1A2 415 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 ZDHHC8Q9ULC8 765 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 HSPB2A8KAH6 182 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 GIMD1P0DJR0 217 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 FSTP19883 344 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 PPP1CCP36873 323 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 HSPB2Q16082 182 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 PEG10Q86TG7 708 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 OR13G1Q8NGZ3 307 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 S100A13Q99584 98 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 SMOC1Q9H4F8 434 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 PRTFDC1Q9NRG1 225 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 UBQLN4Q9NRR5 601 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF701Q9NV72 531 aaPredicted RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 PARPBPQ9NWS1 579 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 BTBD17A6NE02 478 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms