RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 OR51V1Q9H2C8 321 aa7.7□□□□□ -1.18
SMC1A-203ENST00000428014 POFUT1Q9H488 388 aa7.7□□□□□ -1.18
SMC1A-203ENST00000428014 G6PC2Q9NQR9 355 aa7.7□□□□□ -1.18
SMC1A-203ENST00000428014 TVP23BQ9NYZ1 205 aa7.7□□□□□ -1.18
SMC1A-203ENST00000428014 PTTG3PQ9NZH4 202 aa7.7□□□□□ -1.18
SMC1A-203ENST00000428014 KAAG1Q9UBP8 84 aa7.7□□□□□ -1.18
SMC1A-203ENST00000428014 MIOXQ9UGB7 285 aa7.7□□□□□ -1.18
SMC1A-203ENST00000428014 NUFIP1Q9UHK0 495 aaKnown RBP7.7□□□□□ -1.18
SMC1A-203ENST00000428014 LAMP5Q9UJQ1 280 aa7.7□□□□□ -1.18
SMC1A-203ENST00000428014 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.7□□□□□ -1.18
SMC1A-203ENST00000428014 PCDHGB1Q9Y5G3 927 aa7.7□□□□□ -1.18
SMC1A-203ENST00000428014 ORC6Q9Y5N6 252 aa7.7□□□□□ -1.18
SMC1A-203ENST00000428014 DOCK11Q5JSL3 2073 aa7.7□□□□□ -1.18
SMC1A-203ENST00000428014 A0A0G2JMP0 313 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 A0A0X1KG70 313 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 LRP5LA4QPB2 252 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 ANKRD30BLA7E2S9 258 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 PRKYO43930 277 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 MTRF1O75570 445 aaKnown RBP7.69□□□□□ -1.18
SMC1A-203ENST00000428014 PNPP00491 289 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 SBK2P0C263 348 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 PSKH1P11801 424 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 ZNF16P17020 682 aaPredicted RBP7.69□□□□□ -1.18
SMC1A-203ENST00000428014 ADRA2CP18825 462 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 PSMB10P40306 273 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 ZNF121P58317 390 aaPredicted RBP7.69□□□□□ -1.18
SMC1A-203ENST00000428014 BPIFB3P59826 476 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 MAB21L1Q13394 359 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 APOFQ13790 326 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 HLXQ14774 488 aaPredicted RBP7.69□□□□□ -1.18
SMC1A-203ENST00000428014 TRIP10Q15642 601 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 TSTQ16762 297 aaKnown RBP7.69□□□□□ -1.18
SMC1A-203ENST00000428014 ZNF404Q494X3 552 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 KLHL12Q53G59 568 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 GLYATL3Q5SZD4 288 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 FAM120AOSQ5T036 256 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 LYPD4Q6UWN0 246 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 USP43Q70EL4 1123 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 RFLNBQ8N5W9 214 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 MAPK1IP1LQ8NDC0 245 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 OR4M2Q8NGB6 313 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 OR10Z1Q8NGY1 313 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 ITLN1Q8WWA0 313 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 SGK3Q96BR1 496 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 ZMYND19Q96E35 227 aaPredicted RBP7.69□□□□□ -1.18
SMC1A-203ENST00000428014 GAL3ST1Q99999 423 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 FN3KRPQ9HA64 309 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 CENPMQ9NSP4 180 aa7.69□□□□□ -1.18
SMC1A-203ENST00000428014 GGT3PA6NGU5 568 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 LYNX1G3V0Z9 82 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 LHBP01229 141 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 LIPFP07098 398 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 ACAA1P09110 424 aaPredicted RBP7.68□□□□□ -1.18
SMC1A-203ENST00000428014 LYNX1P0DP58 116 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 IRF2P14316 349 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 MUC1P15941 1255 aaPredicted RBP7.68□□□□□ -1.18
SMC1A-203ENST00000428014 ZNF12P17014 697 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 SRD5A1P18405 259 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 CCL1P22362 96 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 RPS27P42677 84 aaKnown RBP7.68□□□□□ -1.18
SMC1A-203ENST00000428014 GSK3AP49840 483 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 PRKXP51817 358 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 RIDAP52758 137 aaKnown RBP7.68□□□□□ -1.18
SMC1A-203ENST00000428014 ACTC1P68032 377 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 ACTA1P68133 377 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 MRPL28Q13084 256 aaKnown RBP7.68□□□□□ -1.18
SMC1A-203ENST00000428014 KPNB1Q14974 876 aaKnown RBP7.68□□□□□ -1.18
SMC1A-203ENST00000428014 OR8G1Q15617 311 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 TIGD6Q17RP2 521 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 CR1LQ2VPA4 569 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 TEX36Q5VZQ5 186 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 DCDC5Q6ZRR9 648 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 NLRC3Q7RTR2 1065 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 KRT77Q7Z794 578 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 AMIGO2Q86SJ2 522 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 NAA40Q86UY6 237 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 PQLC1Q8N2U9 271 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 PACRGLQ8N7B6 248 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 TCEANCQ8N8B7 351 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 SPATA3Q8NHX4 192 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 MRPL48Q96GC5 212 aaKnown RBP7.68□□□□□ -1.18
SMC1A-203ENST00000428014 REEP6Q96HR9 211 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 TECTBQ96PL2 329 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 IL4I1Q96RQ9 567 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 ADAT1Q9BUB4 502 aaKnown RBP7.68□□□□□ -1.18
SMC1A-203ENST00000428014 MED20Q9H944 212 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 ADGRL4Q9HBW9 690 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 S100A14Q9HCY8 104 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 INPP5EQ9NRR6 644 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 MRPS18AQ9NVS2 196 aaKnown RBP7.68□□□□□ -1.18
SMC1A-203ENST00000428014 HIF1ANQ9NWT6 349 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 FAM206AQ9NX38 181 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 RNF7Q9UBF6 113 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 LRP12Q9Y561 859 aa7.68□□□□□ -1.18
SMC1A-203ENST00000428014 TRAV38-1A0A0B4J264 116 aa7.67□□□□□ -1.18
SMC1A-203ENST00000428014 TMEM269A0A1B0GVZ9 245 aa7.67□□□□□ -1.18
SMC1A-203ENST00000428014 OR5B21A6NL26 309 aa7.67□□□□□ -1.18
SMC1A-203ENST00000428014 ANXA2P2A6NMY6 339 aa7.67□□□□□ -1.18
SMC1A-203ENST00000428014 FAM157AC9JC47 383 aa7.67□□□□□ -1.18
SMC1A-203ENST00000428014 ZNF670-ZNF695F2Z2N8 137 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms