RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 PHIPQ8WWQ0 1821 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 LOC285556D6RIA3 1793 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 SYNRGQ9UMZ2 1314 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 A0A1B0GVX0 72 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 PVALEFA0A1B0GWK0 134 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 OR6C74A6NCV1 312 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 SMKR1H3BMG3 65 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 L7N2F9 121 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 NDUFAB1O14561 156 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 CYTH3O43739 400 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 NMT2O60551 498 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 HUS1O60921 280 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 DNAJB6O75190 326 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 CDH16O75309 829 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 LCA5LO95447 670 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 FGFR1OPO95684 399 aaKnown RBP1.47□□□□□ -2.17
PTPRC-208ENST00000427110 GYPCP04921 128 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 BCKDHBP21953 392 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 DTYMKP23919 212 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 NPY1RP25929 384 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 HMOX2P30519 316 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 OTX1P32242 354 aaPredicted RBP1.47□□□□□ -2.17
PTPRC-208ENST00000427110 GPX4P36969 197 aaPredicted RBP1.47□□□□□ -2.17
PTPRC-208ENST00000427110 HCAR3P49019 387 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 P2RX1P51575 399 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 CRISP1P54107 249 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 PRRX1P54821 245 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 FKBP1AP62942 108 aaKnown RBP1.47□□□□□ -2.17
PTPRC-208ENST00000427110 DMTNQ08495 405 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 SYCNQ0VAF6 134 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 GTF3C1Q12789 2109 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 CDH17Q12864 832 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 RCAN2Q14206 197 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 IRF4Q15306 451 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF726P1Q15940 193 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 WHAMMP3Q1A5X7 153 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 ABCA11PQ4W5N1 156 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 ORMDL2Q53FV1 153 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 XKR4Q5GH76 650 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 TWF2Q6IBS0 349 aaKnown RBP1.47□□□□□ -2.17
PTPRC-208ENST00000427110 PRMT9Q6P2P2 845 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 METAP1DQ6UB28 335 aaPredicted RBP1.47□□□□□ -2.17
PTPRC-208ENST00000427110 C12orf54Q6X4T0 127 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 FBXW12Q6X9E4 464 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 Q6ZR03 302 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 SNX20Q7Z614 316 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 LUZP2Q86TE4 346 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 CALHM1Q8IU99 346 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 H1FOOQ8IZA3 346 aaPredicted RBP1.47□□□□□ -2.17
PTPRC-208ENST00000427110 LGI3Q8N145 548 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 KRT222Q8N1A0 295 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 NOXO1Q8NFA2 376 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 OR4C5Q8NGB2 326 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 OR8K1Q8NGG5 319 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 COQ8AQ8NI60 647 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 NUBPLQ8TB37 319 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 TMEM230Q96A57 120 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 DUS3LQ96G46 650 aaKnown RBP1.47□□□□□ -2.17
PTPRC-208ENST00000427110 PRRC1Q96M27 445 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 MBOAT7Q96N66 472 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 TIMM17AQ99595 171 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 HAUS4Q9H6D7 363 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 VPS37BQ9H9H4 285 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 EDA2RQ9HAV5 297 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 C12orf10Q9HB07 376 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 BEX1Q9HBH7 125 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 C6orf50Q9HD87 102 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 CCNB1IP1Q9NPC3 277 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 ZDHHC4Q9NPG8 344 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 TMEM9BQ9NQ34 198 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 SIRT7Q9NRC8 400 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 AGPAT4Q9NRZ5 378 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF355PQ9NSJ1 428 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 NECAP2Q9NVZ3 263 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 DCAF16Q9NXF7 216 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 ZNRD1Q9P1U0 126 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 HYOU1Q9Y4L1 999 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 MGAMO43451 1857 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 NACAE9PAV3 2078 aa1.47□□□□□ -2.17
PTPRC-208ENST00000427110 LCTP09848 1927 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 PTPRFP10586 1907 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 ANK1P16157 1881 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 DOCK1Q14185 1865 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 IGLV1-50A0A075B6I6 118 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 TMEM223A0PJW6 202 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 C7orf66A4D0T2 115 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 TMEM150BA6NC51 233 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 H7C0C1 242 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 WRBO00258 174 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 ZBTB5O15062 677 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 BET1O15155 118 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 NVLO15381 856 aaKnown RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 RBFOX2O43251 390 aaKnown RBP eCLIP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 RAD51CO43502 376 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CHST1O43916 411 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 EIF4E2O60573 245 aaKnown RBP1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CLDN11O75508 207 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 RP2O75695 350 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 SERPINE2P07093 398 aa1.46□□□□□ -2.18
PTPRC-208ENST00000427110 CD3GP09693 182 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms