RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 TVP23BQ9NYZ1 205 aa10.65□□□□□ -0.7
SGCE-203ENST00000425444 MRPL15Q9P015 296 aaKnown RBP10.65□□□□□ -0.7
SGCE-203ENST00000425444 PPIAL4AQ9Y536 164 aa10.65□□□□□ -0.7
SGCE-203ENST00000425444 A6NLC8 198 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 ANKRD30BLA7E2S9 258 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 F5H0A9 414 aaPredicted RBP10.64□□□□□ -0.71
SGCE-203ENST00000425444 CIB2O75838 187 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 AVPP01185 164 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 DDOSTP39656 456 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 OPRL1P41146 370 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 CRISP1P54107 249 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 GNB2P62879 340 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 MZT1Q08AG7 82 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 APOFQ13790 326 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 MPPED2Q15777 294 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 FBLN7Q53RD9 439 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 ARMCX4Q5H9R4 360 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 FAM201AQ5SY85 155 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 LCN1P1Q5VSP4 162 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 C1orf229Q6ZS94 237 aaPredicted RBP10.64□□□□□ -0.71
SGCE-203ENST00000425444 NLRC3Q7RTR2 1065 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 SLC16A9Q7RTY1 509 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 BPIFB2Q8N4F0 458 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 BOLLQ8N9W6 283 aaKnown RBP10.64□□□□□ -0.71
SGCE-203ENST00000425444 SPERTQ8NA61 448 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 BBS1Q8NFJ9 593 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 OR8B3Q8NGG8 313 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 OR52H1Q8NGJ2 320 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 OR8S1Q8NH09 359 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 Q8TCH9 128 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 OR8B2Q96RD0 313 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 MRI1Q9BV20 369 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 SSBP3Q9BWW4 388 aaPredicted RBP10.64□□□□□ -0.71
SGCE-203ENST00000425444 OR10A2Q9H208 303 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 MMADHCQ9H3L0 296 aaPredicted RBP10.64□□□□□ -0.71
SGCE-203ENST00000425444 NTN4Q9HB63 628 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 TMEM165Q9HC07 324 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 KRT84Q9NSB2 600 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 MIOXQ9UGB7 285 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 LAMP5Q9UJQ1 280 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 LRCH1Q9Y2L9 728 aa10.64□□□□□ -0.71
SGCE-203ENST00000425444 PPIAL4CA0A0B4J2A2 164 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 hCG_1807616A0A1W2PRN6 198 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 A8MXK9 166 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 G3V2T6 193 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 GRPP07492 148 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 MRPL3P09001 348 aaKnown RBP10.63□□□□□ -0.71
SGCE-203ENST00000425444 CFL1P23528 166 aaKnown RBP10.63□□□□□ -0.71
SGCE-203ENST00000425444 FASP25445 335 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 PMELP40967 661 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 DAPP51397 102 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 ATP6AP1Q15904 470 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 OCLNQ16625 522 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 ZNF404Q494X3 552 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 FAHD1Q6P587 224 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 KLBQ86Z14 1044 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 PARP8Q8N3A8 854 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 C19orf18Q8NEA5 215 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 DEFB108BQ8NET1 73 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 UTP4Q969X6 686 aaKnown RBP10.63□□□□□ -0.71
SGCE-203ENST00000425444 SPSB4Q96A44 273 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 NEIL1Q96FI4 390 aaPredicted RBP10.63□□□□□ -0.71
SGCE-203ENST00000425444 TMEM246Q9BRR3 403 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 MMP26Q9NRE1 261 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 C14orf119Q9NWQ9 140 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 C1orf123Q9NWV4 160 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 RNF7Q9UBF6 113 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 AP4S1Q9Y587 144 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 AUP1Q9Y679 476 aa10.63□□□□□ -0.71
SGCE-203ENST00000425444 hCG_38984A0A1B0GV85 526 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 WNT2P09544 360 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 FCGR1AP12314 374 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 ZNF12P17014 697 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 SLC2A5P22732 501 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 CD80P33681 288 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 GNALP38405 381 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 PITPNBP48739 271 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 ESRRGP62508 458 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 FAM3AP98173 230 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 ZNF154Q13106 437 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 PTGES3Q15185 160 aaKnown RBP10.62□□□□□ -0.71
SGCE-203ENST00000425444 KCNJ8Q15842 424 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 BTNL3Q6UXE8 466 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 LRRN1Q6UXK5 716 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 RHOUQ7L0Q8 258 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 KRT77Q7Z794 578 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 ZDHHC13Q8IUH4 622 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 FTMTQ8N4E7 242 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 PLPP7Q8NBV4 271 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 SGK3Q96BR1 496 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 PAPOLGQ9BWT3 736 aaKnown RBP10.62□□□□□ -0.71
SGCE-203ENST00000425444 OPN4Q9UHM6 478 aa10.62□□□□□ -0.71
SGCE-203ENST00000425444 POM121CA8CG34 1229 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 C3orf80F5H4A9 247 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 TRAPPC2LH3BP13 241 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 CPT2P23786 658 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 GSK3AP49840 483 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 PSMA6P60900 246 aaKnown RBP10.61□□□□□ -0.71
SGCE-203ENST00000425444 OR8B8Q15620 311 aa10.61□□□□□ -0.71
SGCE-203ENST00000425444 SNCBQ16143 134 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms