RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 SSBP3Q9BWW4 388 aaPredicted RBP12.91□□□□□ -0.34
SPC24-201ENST00000423327 FGF23Q9GZV9 251 aaPredicted RBP12.91□□□□□ -0.34
SPC24-201ENST00000423327 GABARAPL1Q9H0R8 117 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 ESM1Q9NQ30 184 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 COPS3Q9UNS2 423 aa12.91□□□□□ -0.34
SPC24-201ENST00000423327 TNFRSF13BO14836 293 aaPredicted RBP12.9□□□□□ -0.34
SPC24-201ENST00000423327 MRPL3P09001 348 aaKnown RBP12.9□□□□□ -0.34
SPC24-201ENST00000423327 EGR1P18146 543 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 PSMB10P40306 273 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 GSK3AP49840 483 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 PSMA6P60900 246 aaKnown RBP12.9□□□□□ -0.34
SPC24-201ENST00000423327 RPS7P62081 194 aaKnown RBP12.9□□□□□ -0.34
SPC24-201ENST00000423327 EFNB1P98172 346 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 OR8B8Q15620 311 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 TIGD6Q17RP2 521 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 GFOD2Q3B7J2 385 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 C1orf146Q5VVC0 180 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 ZNF454Q8N9F8 522 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 OR8B12Q8NGG6 310 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 OR11L1Q8NGX0 322 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 NANPQ8TBE9 248 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 THEM6Q8WUY1 208 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 C22orf15Q8WYQ4 148 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 LRTOMTQ8WZ04 291 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 NEIL1Q96FI4 390 aaPredicted RBP12.9□□□□□ -0.34
SPC24-201ENST00000423327 PLEKHA8Q96JA3 519 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 FN3KRPQ9HA64 309 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 C1orf123Q9NWV4 160 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 RNF7Q9UBF6 113 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 MIOXQ9UGB7 285 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 NOP16Q9Y3C1 178 aaKnown RBP12.9□□□□□ -0.34
SPC24-201ENST00000423327 LRP12Q9Y561 859 aa12.9□□□□□ -0.34
SPC24-201ENST00000423327 A0A0A6YYJ9 748 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 IGHV2-70DA0A0C4DH43 119 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 ZAR1LA6NP61 321 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 C22orf46C9J442 243 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 PSMD9O00233 223 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 DDOSTP39656 456 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 PITPNBP48739 271 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 ESRRGP62508 458 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 CSNK2BP67870 215 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 PAX8Q06710 450 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 SLX4IPQ5VYV7 408 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 C12orf73Q69YU5 71 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 SFRP4Q6FHJ7 346 aaPredicted RBP12.89□□□□□ -0.35
SPC24-201ENST00000423327 DCDC5Q6ZRR9 648 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 USP43Q70EL4 1123 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 ASRGL1Q7L266 308 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 PLPP7Q8NBV4 271 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 OR52H1Q8NGJ2 320 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 PGAM5Q96HS1 289 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 TEAD3Q99594 435 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 TTTY10Q9BZA0 68 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 OR10A2Q9H208 303 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 MMADHCQ9H3L0 296 aaPredicted RBP12.89□□□□□ -0.35
SPC24-201ENST00000423327 KRT84Q9NSB2 600 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 FAM206AQ9NX38 181 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 OR5V1Q9UGF6 321 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 RHBDD3Q9Y3P4 386 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 AP4S1Q9Y587 144 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 AUP1Q9Y679 476 aa12.89□□□□□ -0.35
SPC24-201ENST00000423327 LGALS8O00214 317 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 ATP5HO75947 161 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 LHBP01229 141 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 APOC1P02654 83 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 GRPP07492 148 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 IRF2P14316 349 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 CPT2P23786 658 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 RASSF2P50749 326 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 GNB2P62879 340 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 ELF3P78545 371 aaPredicted RBP12.88□□□□□ -0.35
SPC24-201ENST00000423327 AADACL4Q5VUY2 407 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 WDR25Q64LD2 544 aaPredicted RBP12.88□□□□□ -0.35
SPC24-201ENST00000423327 FAM90A1Q86YD7 464 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 TEX29Q8N6K0 151 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 ZDHHC22Q8N966 263 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 BOLLQ8N9W6 283 aaKnown RBP12.88□□□□□ -0.35
SPC24-201ENST00000423327 SPERTQ8NA61 448 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 OR8B3Q8NGG8 313 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 ZNF418Q8TF45 676 aaPredicted RBP12.88□□□□□ -0.35
SPC24-201ENST00000423327 HPSE2Q8WWQ2 592 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 ITPKCQ96DU7 683 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 OR8B2Q96RD0 313 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 YIPF3Q9GZM5 350 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 SMURF1Q9HCE7 757 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 ZNF69Q9UC07 566 aa12.88□□□□□ -0.35
SPC24-201ENST00000423327 A0A1B0GW55 424 aa12.87□□□□□ -0.35
SPC24-201ENST00000423327 A6NLC8 198 aa12.87□□□□□ -0.35
SPC24-201ENST00000423327 ANKRD30BLA7E2S9 258 aa12.87□□□□□ -0.35
SPC24-201ENST00000423327 G3V2T6 193 aa12.87□□□□□ -0.35
SPC24-201ENST00000423327 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.87□□□□□ -0.35
SPC24-201ENST00000423327 DUX4L2P0CJ85 424 aa12.87□□□□□ -0.35
SPC24-201ENST00000423327 DUX4L3P0CJ86 424 aa12.87□□□□□ -0.35
SPC24-201ENST00000423327 DUX4L4P0CJ87 422 aa12.87□□□□□ -0.35
SPC24-201ENST00000423327 DUX4L5P0CJ88 424 aa12.87□□□□□ -0.35
SPC24-201ENST00000423327 DUX4L6P0CJ89 424 aa12.87□□□□□ -0.35
SPC24-201ENST00000423327 DUX4L7P0CJ90 424 aa12.87□□□□□ -0.35
SPC24-201ENST00000423327 IGHV4-38-2P0DP08 117 aa12.87□□□□□ -0.35
SPC24-201ENST00000423327 FASP25445 335 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms