RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ACTR3P61158 418 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 KCNJ8Q15842 424 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 SLX4IPQ5VYV7 408 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 NXNL2Q5VZ03 156 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 MEPCEQ7L2J0 689 aaKnown RBP9.41□□□□□ -0.9
RFFL-204ENST00000414419 NLRC3Q7RTR2 1065 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 PRSS45Q7RTY3 260 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 GID4Q8IVV7 300 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 BOLLQ8N9W6 283 aaKnown RBP9.41□□□□□ -0.9
RFFL-204ENST00000414419 NANPQ8TBE9 248 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 TMEM163Q8TC26 289 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 Q8TCH9 128 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 ASB17Q8WXJ9 295 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 DVL3Q92997 716 aaPredicted RBP9.41□□□□□ -0.9
RFFL-204ENST00000414419 IL4I1Q96RQ9 567 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 CNN2Q99439 309 aaKnown RBP9.41□□□□□ -0.9
RFFL-204ENST00000414419 CIB1Q99828 191 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 RBM4BQ9BQ04 359 aaKnown RBP9.41□□□□□ -0.9
RFFL-204ENST00000414419 OSBPL10Q9BXB5 764 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 TMEM165Q9HC07 324 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 OR5V1Q9UGF6 321 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 IKZF2Q9UKS7 526 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 OAZ3Q9UMX2 235 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 LRCH1Q9Y2L9 728 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 LRP12Q9Y561 859 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 ORC6Q9Y5N6 252 aa9.41□□□□□ -0.9
RFFL-204ENST00000414419 LOC105371242A0A075B767 164 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 PPIAL4CA0A0B4J2A2 164 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 hCG_38984A0A1B0GV85 526 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 TMEM269A0A1B0GVZ9 245 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 hCG_1807616A0A1W2PRN6 198 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 ANXA2P2A6NMY6 339 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 PHYHO14832 338 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 ZNF254O75437 659 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 FSTL3O95633 263 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 WNT2P09544 360 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 ZFP36P26651 326 aaKnown RBP9.4□□□□□ -0.9
RFFL-204ENST00000414419 PSMA6P60900 246 aaKnown RBP9.4□□□□□ -0.9
RFFL-204ENST00000414419 GNB2P62879 340 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 KPNB1Q14974 876 aaKnown RBP9.4□□□□□ -0.9
RFFL-204ENST00000414419 MPPED2Q15777 294 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 ZNF404Q494X3 552 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 FAM201AQ5SY85 155 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 C12orf73Q69YU5 71 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 ZFP1Q6P2D0 407 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 DEGS2Q6QHC5 323 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 COMMD2Q86X83 199 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 DEFB108BQ8NET1 73 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 OR8B3Q8NGG8 313 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 SPATA3Q8NHX4 192 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 NEIL1Q96FI4 390 aaPredicted RBP9.4□□□□□ -0.9
RFFL-204ENST00000414419 OR8B2Q96RD0 313 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 TMEM246Q9BRR3 403 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 MRI1Q9BV20 369 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 PAPOLGQ9BWT3 736 aaKnown RBP9.4□□□□□ -0.9
RFFL-204ENST00000414419 SSBP3Q9BWW4 388 aaPredicted RBP9.4□□□□□ -0.9
RFFL-204ENST00000414419 TMPRSS13Q9BYE2 586 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 RIBC2Q9H4K1 309 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 TRIM36Q9NQ86 728 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 C1orf123Q9NWV4 160 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 ZNF391Q9UJN7 358 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 KLHDC2Q9Y2U9 406 aa9.4□□□□□ -0.9
RFFL-204ENST00000414419 FBN1P35555 2871 aaKnown RBP9.39□□□□□ -0.91
RFFL-204ENST00000414419 CCDC182A6NF36 153 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 ACOD1A6NK06 481 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 ZNF670-ZNF695F2Z2N8 137 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 F5H0A9 414 aaPredicted RBP9.39□□□□□ -0.91
RFFL-204ENST00000414419 M0R129 80 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 PSMD9O00233 223 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 EPHA2P29317 976 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 ATP6V1E1P36543 226 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 RIDAP52758 137 aaKnown RBP9.39□□□□□ -0.91
RFFL-204ENST00000414419 CDC42P60953 191 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 CXCR4P61073 352 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 SEC61A1P61619 476 aaKnown RBP9.39□□□□□ -0.91
RFFL-204ENST00000414419 IL5RAQ01344 420 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 OR8B8Q15620 311 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 ZNF829Q3KNS6 432 aaPredicted RBP9.39□□□□□ -0.91
RFFL-204ENST00000414419 SFRP4Q6FHJ7 346 aaPredicted RBP9.39□□□□□ -0.91
RFFL-204ENST00000414419 BTNL3Q6UXE8 466 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 DCDC5Q6ZRR9 648 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 BCDIN3DQ7Z5W3 292 aaKnown RBP9.39□□□□□ -0.91
RFFL-204ENST00000414419 SLC35F2Q8IXU6 374 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 ZNF679Q8IYX0 411 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 OR8B12Q8NGG6 310 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 FAM81AQ8TBF8 368 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 ZNF418Q8TF45 676 aaPredicted RBP9.39□□□□□ -0.91
RFFL-204ENST00000414419 HIST1H2AAQ96QV6 131 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 OR8B4Q96RC9 309 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 MNTQ99583 582 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 MICU1Q9BPX6 476 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 TTTY10Q9BZA0 68 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 ABCB9Q9NP78 766 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 ZNF319Q9P2F9 582 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 POLR3KQ9Y2Y1 108 aaPredicted RBP9.39□□□□□ -0.91
RFFL-204ENST00000414419 MPC1Q9Y5U8 109 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 AUP1Q9Y679 476 aa9.39□□□□□ -0.91
RFFL-204ENST00000414419 SVEP1Q4LDE5 3571 aa9.38□□□□□ -0.91
RFFL-204ENST00000414419 TRAV38-1A0A0B4J264 116 aa9.38□□□□□ -0.91
RFFL-204ENST00000414419 A8MXK9 166 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms